Orthogroup:group_1353


Homologs in group_1353

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_08385 FBDBKF_08385 Morganella morganii S1 recQ ATP-dependent DNA helicase RecQ
EHELCC_13140 EHELCC_13140 Morganella morganii S2 recQ ATP-dependent DNA helicase RecQ
NLDBIP_13480 NLDBIP_13480 Morganella morganii S4 recQ ATP-dependent DNA helicase RecQ
LHKJJB_13075 LHKJJB_13075 Morganella morganii S3 recQ ATP-dependent DNA helicase RecQ
HKOGLL_11955 HKOGLL_11955 Morganella morganii S5 recQ ATP-dependent DNA helicase RecQ
F4V73_RS09585 F4V73_RS09585 Morganella psychrotolerans recQ ATP-dependent DNA helicase RecQ
PMI_RS16640 PMI_RS16640 Proteus mirabilis HI4320 recQ ATP-dependent DNA helicase RecQ

Distribution of group_1353 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1353 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1353

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1353.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 recQ 7

Product

# Product Occurence
1 ATP-dependent DNA helicase RecQ 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0514 7 L Replication, recombination and repair (L) Superfamily II DNA helicase RecQ

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03654 7 ATP-dependent DNA helicase RecQ [EC:5.6.2.4] RNA degradation -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00270 7 DEAD/DEAH box helicase
PF00271 7 Helicase conserved C-terminal domain
PF00570 7 HRDC domain
PF09382 7 RQC domain
PF16124 7 RecQ zinc-binding

Annotations of the 603 SwissProt hits

Annotation Number of occurrences
ATP-dependent DNA helicase Hel308 3
ATP-dependent DNA helicase Q-like 1 1
ATP-dependent DNA helicase Q-like 2 1
ATP-dependent DNA helicase Q-like 3 1
ATP-dependent DNA helicase Q-like 4A 1
ATP-dependent DNA helicase Q-like 4B 1
ATP-dependent DNA helicase Q-like 5 1
ATP-dependent DNA helicase Q-like SIM 1
ATP-dependent DNA helicase Q1 4
ATP-dependent DNA helicase Q4 2
ATP-dependent DNA helicase Q5 3
ATP-dependent DNA helicase RecQ 6
ATP-dependent DNA helicase UvrD2 3
ATP-dependent DNA helicase hus2/rqh1 1
ATP-dependent DNA helicase tlh1 (Fragment) 1
ATP-dependent DNA helicase tlh2 1
ATP-dependent RNA helicase CHR1 1
ATP-dependent RNA helicase CshA 2
ATP-dependent RNA helicase DBP2 18
ATP-dependent RNA helicase DBP3 11
ATP-dependent RNA helicase DBP4 13
ATP-dependent RNA helicase DBP5 2
ATP-dependent RNA helicase DBP8 3
ATP-dependent RNA helicase DDX18 1
ATP-dependent RNA helicase DDX4 1
ATP-dependent RNA helicase DDX42 5
ATP-dependent RNA helicase DDX47 1
ATP-dependent RNA helicase DDX50 2
ATP-dependent RNA helicase DED1 6
ATP-dependent RNA helicase DHH1 19
ATP-dependent RNA helicase DbpA 4
ATP-dependent RNA helicase DeaD 11
ATP-dependent RNA helicase FAL1 21
ATP-dependent RNA helicase HAS1 17
ATP-dependent RNA helicase ROK1 6
ATP-dependent RNA helicase RhlB 60
ATP-dependent RNA helicase RhlE 1
ATP-dependent RNA helicase SrmB 2
ATP-dependent RNA helicase VAD1 1
ATP-dependent RNA helicase abstrakt 1
ATP-dependent RNA helicase cgh-1 1
ATP-dependent RNA helicase dbp-3 1
ATP-dependent RNA helicase dbp-4 1
ATP-dependent RNA helicase dbp2 10
ATP-dependent RNA helicase dbp3 10
ATP-dependent RNA helicase dbp4 9
ATP-dependent RNA helicase dbp5 6
ATP-dependent RNA helicase dbp8 7
ATP-dependent RNA helicase ddx23 1
ATP-dependent RNA helicase ddx6 1
ATP-dependent RNA helicase dhh1 8
ATP-dependent RNA helicase eIF4A 30
ATP-dependent RNA helicase fal-1 1
ATP-dependent RNA helicase fal1 10
ATP-dependent RNA helicase has-1 1
ATP-dependent RNA helicase has1 8
ATP-dependent RNA helicase me31b 1
ATP-dependent RNA helicase p62 1
ATP-dependent RNA helicase rok1 1
ATP-dependent RNA helicase uap56 1
ATP-dependent RNA helicase vasa 1
ATP-dependent RNA helicase-like protein DB10 1
ATP-dependent helicase SGS1 1
ATP-dependent helicase wrn-1 1
ATP-dependent rRNA helicase RRP3 12
ATP-dependent rRNA helicase SPB4 1
ATP-dependent rRNA helicase rrp-3 1
ATP-dependent rRNA helicase rrp3 10
Bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN 3
DEAD-box ATP-dependent RNA helicase 12 2
DEAD-box ATP-dependent RNA helicase 13 2
DEAD-box ATP-dependent RNA helicase 14 2
DEAD-box ATP-dependent RNA helicase 20 2
DEAD-box ATP-dependent RNA helicase 21 2
DEAD-box ATP-dependent RNA helicase 24 2
DEAD-box ATP-dependent RNA helicase 25 2
DEAD-box ATP-dependent RNA helicase 26 1
DEAD-box ATP-dependent RNA helicase 3, chloroplastic 2
DEAD-box ATP-dependent RNA helicase 30 1
DEAD-box ATP-dependent RNA helicase 31 2
DEAD-box ATP-dependent RNA helicase 32 2
DEAD-box ATP-dependent RNA helicase 34 1
DEAD-box ATP-dependent RNA helicase 35 1
DEAD-box ATP-dependent RNA helicase 35A 1
DEAD-box ATP-dependent RNA helicase 35B 1
DEAD-box ATP-dependent RNA helicase 3A, chloroplastic 1
DEAD-box ATP-dependent RNA helicase 3B, chloroplastic 1
DEAD-box ATP-dependent RNA helicase 40 2
DEAD-box ATP-dependent RNA helicase 41 2
DEAD-box ATP-dependent RNA helicase 42 2
DEAD-box ATP-dependent RNA helicase 45 1
DEAD-box ATP-dependent RNA helicase 46 1
DEAD-box ATP-dependent RNA helicase 5 1
DEAD-box ATP-dependent RNA helicase 51 1
DEAD-box ATP-dependent RNA helicase 52A 1
DEAD-box ATP-dependent RNA helicase 53 1
DEAD-box ATP-dependent RNA helicase 53, mitochondrial 1
DEAD-box ATP-dependent RNA helicase 57 2
DEAD-box ATP-dependent RNA helicase 6 2
DEAD-box ATP-dependent RNA helicase 8 2
DEAD-box ATP-dependent RNA helicase 9 1
DEAD-box ATP-dependent RNA helicase 9, mitochondrial 1
DEAD-box ATP-dependent RNA helicase CshA 24
DEAD-box ATP-dependent RNA helicase CshB 3
DEAD-box ATP-dependent RNA helicase CshC 1
DEAD-box ATP-dependent RNA helicase CshE 1
DEAD-box ATP-dependent RNA helicase RhpA 2
Eukaryotic initiation factor 4A 6
Eukaryotic initiation factor 4A-1 2
Eukaryotic initiation factor 4A-10 1
Eukaryotic initiation factor 4A-11 1
Eukaryotic initiation factor 4A-14 1
Eukaryotic initiation factor 4A-15 1
Eukaryotic initiation factor 4A-2 2
Eukaryotic initiation factor 4A-3 3
Eukaryotic initiation factor 4A-6 (Fragment) 1
Eukaryotic initiation factor 4A-7 1
Eukaryotic initiation factor 4A-8 1
Eukaryotic initiation factor 4A-9 1
Eukaryotic initiation factor 4A-I 1
Eukaryotic initiation factor 4A-III 12
Eukaryotic initiation factor 4A-III homolog 1
Eukaryotic initiation factor 4A-III homolog A 1
Eukaryotic initiation factor 4A-III homolog B 1
Eukaryotic initiation factor 4A-III-A 1
Eukaryotic initiation factor 4A-III-B 1
Nucleolar RNA helicase 2-A 1
Nucleolar RNA helicase 2-B 1
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 10
Pre-mRNA-processing ATP-dependent RNA helicase prp-5 1
Pre-mRNA-processing ATP-dependent RNA helicase prp5 4
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 11
Pre-mRNA-splicing ATP-dependent RNA helicase prp-28 1
Pre-mRNA-splicing ATP-dependent RNA helicase prp28 4
Probable ATP-dependent DNA helicase RecS 1
Probable ATP-dependent RNA helicase DDX10 3
Probable ATP-dependent RNA helicase DDX17 2
Probable ATP-dependent RNA helicase DDX23 2
Probable ATP-dependent RNA helicase DDX4 7
Probable ATP-dependent RNA helicase DDX41 2
Probable ATP-dependent RNA helicase DDX43 1
Probable ATP-dependent RNA helicase DDX47 3
Probable ATP-dependent RNA helicase DDX5 5
Probable ATP-dependent RNA helicase DDX52 5
Probable ATP-dependent RNA helicase DDX53 1
Probable ATP-dependent RNA helicase DDX59 3
Probable ATP-dependent RNA helicase DDX6 4
Probable ATP-dependent RNA helicase DDX6 (Fragment) 1
Probable ATP-dependent RNA helicase MJ0669 1
Probable ATP-dependent RNA helicase YfmL 1
Probable ATP-dependent RNA helicase ddx17 1
Probable ATP-dependent RNA helicase ddx18 1
Probable ATP-dependent RNA helicase ddx20 1
Probable ATP-dependent RNA helicase ddx41 1
Probable ATP-dependent RNA helicase ddx42 1
Probable ATP-dependent RNA helicase ddx49 1
Probable ATP-dependent RNA helicase ddx52 1
Probable ATP-dependent RNA helicase ddx6 2
Probable ATP-dependent RNA helicase pitchoune 1
Probable eukaryotic initiation factor 4A 5
Putative ATP-dependent DNA helicase Q1 2
Putative ATP-dependent RNA helicase R290 1
Putative ATP-dependent RNA helicase ste13 1
Putative DEAD-box ATP-dependent RNA helicase 43 1
Putative DEAD-box ATP-dependent RNA helicase 44 1
Putative DEAD-box RNA helicase HEL64 1
RNA helicase CrhR 1
RecQ-like DNA helicase BLM 4
RecQ-like DNA helicase Blm 1
RecQ-like DNA helicase blm-1 1

Protein length

Min length 608
Max length 609
Mean length (sd) 608.1 (0.4)
Median length 608.0

Protein length distribution