COG3851


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG3851, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Signal transduction histidine kinase UhpB, glucose-6-phosphate specific
Function(s) descr. Signal transduction mechanisms (T)

Occurence in the database

COG3851 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1296 FBDBKF_07935 118231 119778 -1 uhpB Signal transduction histidine kinase UhpB, glucose-6-phosphate specific Morganella morganii S1
1 group_1296 EHELCC_13765 92425 93972 -1 uhpB Signal transduction histidine kinase UhpB, glucose-6-phosphate specific Morganella morganii S2
2 group_1296 NLDBIP_14210 113300 114847 -1 uhpB Signal transduction histidine kinase UhpB, glucose-6-phosphate specific Morganella morganii S4
3 group_1296 LHKJJB_08640 44902 46449 1 uhpB Signal transduction histidine kinase UhpB, glucose-6-phosphate specific Morganella morganii S3
4 group_1296 HKOGLL_08190 44902 46449 1 uhpB Signal transduction histidine kinase UhpB, glucose-6-phosphate specific Morganella morganii S5
5 group_1296 F4V73_RS13050 223647 225194 1 MASE1 domain-containing protein Morganella psychrotolerans
6 group_1296 PMI_RS00925 228702 230249 -1 MASE1 domain-containing protein Proteus mirabilis HI4320