Orthogroup:group_1332



Homologs in group_1332

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_08240 FBDBKF_08240 Morganella morganii S1 rffG dTDP-glucose 4,6-dehydratase
EHELCC_13285 EHELCC_13285 Morganella morganii S2 rffG dTDP-glucose 4,6-dehydratase
NLDBIP_13625 NLDBIP_13625 Morganella morganii S4 rffG dTDP-glucose 4,6-dehydratase
LHKJJB_12930 LHKJJB_12930 Morganella morganii S3 rffG dTDP-glucose 4,6-dehydratase
HKOGLL_12100 HKOGLL_12100 Morganella morganii S5 rffG dTDP-glucose 4,6-dehydratase
F4V73_RS18790 F4V73_RS18790 Morganella psychrotolerans rffG dTDP-glucose 4,6-dehydratase
PMI_RS16500 PMI_RS16500 Proteus mirabilis HI4320 rffG dTDP-glucose 4,6-dehydratase

Distribution of group_1332 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1332 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1332

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1332.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rffG 7

Product

# Product Occurence
1 dTDP-glucose 4,6-dehydratase 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1088 7 M Cell wall/membrane/envelope biogenesis (M) dTDP-D-glucose 4,6-dehydratase

Kegg Ortholog Annotation(s)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF16363 7 GDP-mannose 4,6 dehydratase

Virulence factor Annotation(s)

VF gene ID Occurences Protein VF ID Category
VFG007659 7 dTDP-glucose 4,6-dehydratase VF0624 Immune modulation

Annotations of the 348 SwissProt hits

Annotation Number of occurrences
2-alkyl-3-oxoalkanoate reductase 2
3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type 2 1
3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2 1
3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 3 1
ADP-L-glycero-D-manno-heptose-6-epimerase 54
Alcohol dehydrogenase 1
Bifunctional UDP-glucose 4-epimerase and UDP-xylose 4-epimerase 1 2
Bifunctional UDP-glucose 4-epimerase and UDP-xylose 4-epimerase 3 1
Bifunctional polymyxin resistance protein ArnA 66
Bifunctional protein GAL10 3
Bifunctional protein GAL10 (Fragment) 1
Bifunctional protein gal10 1
CDP-6-D-glucitol synthase 1
CDP-abequose synthase 1
CDP-glucose 4,6-dehydratase 1
CDP-paratose 2-epimerase 1
Capsular polysaccharide biosynthesis protein CapD 1
D-erythronate dehydrogenase 1
GDP-6-deoxy-D-mannose reductase 2
GDP-6-deoxy-D-talose 4-dehydrogenase 1
GDP-L-colitose synthase 1
GDP-L-fucose synthase 8
GDP-L-fucose synthase 1 1
GDP-mannose 3,5-epimerase 1 2
GDP-mannose 3,5-epimerase 2 1
GDP-mannose 4,6 dehydratase 5
GDP-mannose 4,6 dehydratase 1 3
GDP-mannose 4,6 dehydratase 2 2
GDP-mannose 4,6-dehydratase 11
GDP-mannose 4,6-dehydratase sdnI 1
Hybrid PKS-NRPS synthetase pydA 1
Hybrid PKS-NRPS synthetase xenE 1
Ketoreductase azaE 1
Low-salt glycan biosynthesis protein Agl12 1
Methionine adenosyltransferase 2 subunit beta 6
Probable GDP-L-fucose synthase 1 1
Probable UDP-arabinose 4-epimerase 1 1
Probable UDP-arabinose 4-epimerase 2 1
Probable UDP-arabinose 4-epimerase 3 2
Probable UDP-glucuronate 4-epimerase 1
Probable dTDP-glucose 4,6-dehydratase 1
Probable low-salt glycan biosynthesis reductase Agl14 1
Probable polysaccharide biosynthesis protein EpsC 1
Protein CapI 1
Putative GDP-L-fucose synthase 2 2
Putative UDP-arabinose 4-epimerase 2 1
Putative UDP-arabinose 4-epimerase 4 1
Putative UDP-glucose 4-epimerase 1
Putative bifunctional polymyxin resistance protein ArnA 1
Putative dTDP-D-glucose 4,6-dehydratase 1
Putative sugar dehydratase/epimerase YfnG 1
Short chain dehydrogenases/reductase notP' 1
Spore coat polysaccharide biosynthesis protein SpsK 1
Sterol-4-alpha-carboxylate 3-dehydrogenase ERG26, decarboxylating 1
Sterol-4-alpha-carboxylate 3-dehydrogenase erg26, decarboxylating 1
Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1 1
Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM2 1
Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM3 1
UDP-D-apiose/UDP-D-xylose synthase 1
UDP-D-apiose/UDP-D-xylose synthase 1 1
UDP-D-apiose/UDP-D-xylose synthase 2 1
UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase 1
UDP-N-acetylglucosamine 4,6-dehydratase (inverting) 1
UDP-N-acetylglucosamine 4-epimerase 1
UDP-arabinose 4-epimerase 1 1
UDP-glucose 4-epimerase 41
UDP-glucose 4-epimerase (Fragment) 1
UDP-glucose 4-epimerase 1 1
UDP-glucose 4-epimerase 2 2
UDP-glucose 4-epimerase 3 1
UDP-glucose 4-epimerase 4 2
UDP-glucose 4-epimerase 5 1
UDP-glucose 4-epimerase GEPI42 1
UDP-glucose 4-epimerase GEPI48 1
UDP-glucose 4-epimerase uge1 1
UDP-glucuronate 4-epimerase 2
UDP-glucuronate 4-epimerase 1 1
UDP-glucuronate 4-epimerase 2 1
UDP-glucuronate 4-epimerase 3 1
UDP-glucuronate 4-epimerase 4 1
UDP-glucuronate 4-epimerase 5 1
UDP-glucuronate 4-epimerase 6 1
UDP-glucuronic acid decarboxylase 1 7
UDP-glucuronic acid decarboxylase 2 1
UDP-glucuronic acid decarboxylase 3 1
UDP-glucuronic acid decarboxylase 4 1
UDP-glucuronic acid decarboxylase 5 1
UDP-glucuronic acid decarboxylase 6 1
UDP-sulfoquinovose synthase, chloroplastic 2
Uncharacterized 37.6 kDa protein in cld 5'region 1
Uncharacterized UDP-glucose epimerase YtcB 1
Uncharacterized epimerase/dehydratase MW0508 1
Uncharacterized epimerase/dehydratase SA0511 1
Uncharacterized epimerase/dehydratase SAB0504 1
Uncharacterized epimerase/dehydratase SACOL0599 1
Uncharacterized epimerase/dehydratase SAOUHSC_00535 1
Uncharacterized epimerase/dehydratase SAR0558 1
Uncharacterized epimerase/dehydratase SAS0511 1
Uncharacterized epimerase/dehydratase SAUSA300_0538 1
Uncharacterized epimerase/dehydratase SAV0553 1
Uncharacterized epimerase/dehydratase SERP0194 1
Uncharacterized epimerase/dehydratase SE_0317 1
Uncharacterized epimerase/dehydratase SH2450 1
Uncharacterized epimerase/dehydratase SSP2164 1
Uncharacterized membrane protein MJ1061 1
Uncharacterized protein MJ1055 1
Uncharacterized protein PB2B2.11 1
Uncharacterized protein in galE 3'region (Fragment) 1
Uncharacterized protein y4nG 1
Uncharacterized protein y4nL 1
Uronate dehydrogenase 2
Vi polysaccharide biosynthesis protein VipB/TviC 1
dTDP-4-dehydro-6-deoxy-D-allose reductase 2
dTDP-4-dehydro-6-deoxyglucose reductase 1
dTDP-4-dehydrorhamnose reductase 1
dTDP-D-glucose 4,6-dehydratase 4
dTDP-L-rhamnose 4-epimerase 1
dTDP-glucose 4,6-dehydratase 19
dTDP-glucose 4,6-dehydratase 1 1
dTDP-glucose 4,6-dehydratase 2 1

Protein length

Min length 357
Max length 359
Mean length (sd) 357.3 (0.8)
Median length 357.0

Protein length distribution