COG0252


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0252, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 14 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D
Function(s) descr. Translation, ribosomal structure and biogenesis (J)
Amino acid transport and metabolism (E)

Occurence in the database

COG0252 is associated with 14 different proteins (see tab "Protein list" and "Profile")
The 14 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_980 FBDBKF_05415 92912 93931 1 ansA asparaginase Morganella morganii S1
1 group_1274 FBDBKF_07630 37600 38643 1 ansB L-asparaginase 2 Morganella morganii S1
2 group_980 EHELCC_12175 87563 88582 -1 ansA asparaginase Morganella morganii S2
3 group_1274 EHELCC_13460 11794 12837 1 ansB L-asparaginase 2 Morganella morganii S2
4 group_980 NLDBIP_12515 87518 88537 -1 ansA asparaginase Morganella morganii S4
5 group_1274 NLDBIP_13905 32669 33712 1 ansB L-asparaginase 2 Morganella morganii S4
6 group_1274 LHKJJB_08945 126037 127080 -1 ansB L-asparaginase 2 Morganella morganii S3
7 group_980 LHKJJB_12375 87563 88582 -1 ansA asparaginase Morganella morganii S3
8 group_1274 HKOGLL_08495 126037 127080 -1 ansB L-asparaginase 2 Morganella morganii S5
9 group_980 HKOGLL_10990 87563 88582 -1 ansA asparaginase Morganella morganii S5
10 group_980 F4V73_RS03880 820901 821920 -1 ansA asparaginase Morganella psychrotolerans
11 group_1274 F4V73_RS13490 332051 333094 -1 ansB L-asparaginase 2 Morganella psychrotolerans
12 group_1274 PMI_RS03485 775915 776952 1 ansB L-asparaginase 2 Proteus mirabilis HI4320
13 group_980 PMI_RS07270 1592985 1594007 1 ansA asparaginase Proteus mirabilis HI4320