Orthogroup:group_1330


Homologs in group_1330

Help

7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_07510 FBDBKF_07510 Morganella morganii S1 uhpC Sugar phosphate permease
EHELCC_17180 EHELCC_17180 Morganella morganii S2 uhpC Sugar phosphate permease
NLDBIP_13785 NLDBIP_13785 Morganella morganii S4 uhpC Sugar phosphate permease
LHKJJB_09065 LHKJJB_09065 Morganella morganii S3 uhpC Sugar phosphate permease
HKOGLL_08615 HKOGLL_08615 Morganella morganii S5 uhpC Sugar phosphate permease
F4V73_RS13600 F4V73_RS13600 Morganella psychrotolerans - MFS transporter
PMI_RS17075 PMI_RS17075 Proteus mirabilis HI4320 - MFS transporter

Distribution of group_1330 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of group_1330 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1330

Orthogroup content: 7 members

Help

This page summarizes the annotation of all members of the orthologous group group_1330.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 uhpC 5
2 - 2

Product

# Product Occurence
1 Sugar phosphate permease 5
2 MFS transporter 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG2271 7 G Carbohydrate transport and metabolism (G) Sugar phosphate permease

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K26602 2 MFS transporter, GlpU family, inner membrane protein - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF07690 2 Major Facilitator Superfamily

Annotations of the 5 SwissProt hits

Annotation Number of occurrences
Inner membrane protein YihN 1
Inner membrane protein YqcE 1
Probable nitrate/nitrite antiporter NarK1 1
Uncharacterized protein MG294 1
Uncharacterized protein MG294 homolog 1

Protein length

Min length 155
Max length 421
Mean length (sd) 230.1 (128.3)
Median length 155.0

Protein length distribution