Homologs in group_1271

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_07510 FBDBKF_07510 49.7 Morganella morganii S1 uhpC Sugar phosphate permease
EHELCC_17180 EHELCC_17180 49.7 Morganella morganii S2 uhpC Sugar phosphate permease
NLDBIP_13785 NLDBIP_13785 49.7 Morganella morganii S4 uhpC Sugar phosphate permease
LHKJJB_09065 LHKJJB_09065 49.7 Morganella morganii S3 uhpC Sugar phosphate permease
HKOGLL_08615 HKOGLL_08615 49.7 Morganella morganii S5 uhpC Sugar phosphate permease
F4V73_RS13600 F4V73_RS13600 50.4 Morganella psychrotolerans - MFS transporter

Distribution of the homologs in the orthogroup group_1271

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1271

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P32135 8.76e-137 401 49 2 408 1 yihN Inner membrane protein YihN Escherichia coli (strain K12)
P77031 1.2e-43 160 26 2 382 1 yqcE Inner membrane protein YqcE Escherichia coli (strain K12)
Q49411 2.71e-05 50 22 15 452 4 MG294 Uncharacterized protein MG294 Mycoplasma genitalium (strain ATCC 33530 / DSM 19775 / NCTC 10195 / G37)
Q9RA46 0.000334 46 23 14 316 3 narK1 Probable nitrate/nitrite antiporter NarK1 Thermus thermophilus

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS17075
Feature type CDS
Gene -
Product MFS transporter
Location 3757333 - 3758580 (strand: 1)
Length 1248 (nucleotides) / 415 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1271
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF07690 Major Facilitator Superfamily

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2271 Carbohydrate transport and metabolism (G) G Sugar phosphate permease

Protein Sequence

MNKWGKLCFLILGGGTIFKLSSMKDVFYVPMQQDWGLSNTQIGFGFTIYAIIQTIGLFSSLYIADRFSKKILLPAGLIGVGLCGAYLSTLPPFTGYLIAFGAMAFFGEVVYWPVLLKSVRLLGNKEEQGRMFGFLEAGRGVVDVLVASGALYIFVLFGEGKTGMQAGLIYYTLATIIVGIITYFIVDNDDKKETSSASEANRQVLEGIKNVVKCPNLWLASMSIFFVYSAYCGLTYFIPFLKDIYALPIALIGAYGIINQYALKMIGGPLGGFLADKVAKSPTIYLKWTFLLSAIAMAIFIMLPHDSMNVYLGMTATLGFGAIIFSQRAIFFAPMDEIGTPRQYAGSAMAFGCIIGYMPSMFAYALYGSLLDNFEGIQGYNYVFSIMVTFSLLGFICATILAKRIKMINNTLNIA

Flanking regions ( +/- flanking 50bp)

GTTTTAATTGAAATAGAAGCTATCGCTTATAAAAAATAGGAAATATGATCATGAATAAATGGGGAAAATTATGTTTTCTTATTTTGGGTGGTGGGACTATATTCAAACTATCCAGCATGAAAGATGTATTTTATGTGCCAATGCAACAAGATTGGGGATTATCTAACACCCAAATTGGTTTTGGCTTTACTATTTATGCCATTATTCAAACAATCGGATTATTTTCATCATTGTATATTGCCGATCGCTTCTCTAAGAAAATTTTATTACCAGCGGGCTTAATTGGGGTAGGTTTATGTGGTGCTTATTTAAGCACACTGCCTCCTTTTACGGGTTATTTAATTGCATTTGGTGCAATGGCATTTTTCGGTGAGGTTGTTTATTGGCCTGTTTTACTAAAATCGGTACGTTTATTAGGAAATAAAGAAGAACAAGGACGTATGTTTGGTTTTCTAGAAGCTGGGCGAGGGGTTGTTGATGTTCTAGTAGCTTCGGGAGCTCTTTATATATTTGTTTTATTTGGTGAAGGTAAAACAGGTATGCAAGCAGGATTAATTTATTATACGCTTGCTACAATAATAGTAGGTATAATTACATATTTTATTGTGGATAATGACGATAAGAAGGAAACCTCCTCAGCAAGTGAAGCTAATCGCCAAGTTTTGGAAGGGATTAAAAATGTCGTAAAATGTCCTAACTTATGGTTAGCATCAATGAGTATCTTCTTTGTTTATTCTGCTTACTGTGGGTTAACTTATTTTATTCCTTTTTTAAAAGATATTTACGCACTACCAATAGCCCTTATCGGTGCCTATGGCATTATTAATCAATATGCACTAAAAATGATAGGTGGTCCATTAGGCGGATTTTTAGCTGACAAAGTTGCAAAATCGCCAACAATATATCTGAAATGGACATTTTTATTATCTGCGATTGCAATGGCTATTTTCATTATGTTGCCTCATGACTCAATGAATGTCTATTTAGGTATGACTGCAACATTAGGTTTCGGTGCAATCATTTTCTCGCAAAGAGCTATTTTCTTTGCACCAATGGATGAAATTGGAACACCAAGACAATATGCAGGTTCAGCGATGGCGTTTGGGTGTATTATTGGTTATATGCCTTCCATGTTTGCTTATGCTCTCTATGGGTCATTATTAGATAATTTTGAGGGCATTCAAGGATATAACTATGTATTTAGTATTATGGTCACTTTTAGTTTGCTTGGTTTTATTTGTGCAACCATATTAGCTAAGCGTATTAAAATGATAAATAACACTTTAAATATAGCTTAAAAATAGACACCGCTTAATTGTGATCTAGCAAACACTGCTTCATCGATTGG