Orthogroup:group_133


Homologs in group_133

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10 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_13170 FBDBKF_13170 Morganella morganii S1 - Methyltransferase
EHELCC_19515 EHELCC_19515 Morganella morganii S2 - Methyltransferase
NLDBIP_09250 NLDBIP_09250 Morganella morganii S4 - Methyltransferase
NLDBIP_19070 NLDBIP_19070 Morganella morganii S4 - Methyltransferase
LHKJJB_05015 LHKJJB_05015 Morganella morganii S3 - Methyltransferase
LHKJJB_18960 LHKJJB_18960 Morganella morganii S3 - Methyltransferase
HKOGLL_05900 HKOGLL_05900 Morganella morganii S5 - Methyltransferase
F4V73_RS02045 F4V73_RS02045 Morganella psychrotolerans - site-specific DNA-methyltransferase
PMI_RS15540 PMI_RS15540 Proteus mirabilis HI4320 - restriction endonuclease
PMI_RS15545 PMI_RS15545 Proteus mirabilis HI4320 - DNA methyltransferase

Distribution of group_133 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_133 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_133

Orthogroup content: 10 members

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This page summarizes the annotation of all members of the orthologous group group_133.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 - 10

Product

# Product Occurence
1 Methyltransferase 7
2 site-specific DNA-methyltransferase 1
3 restriction endonuclease 1
4 DNA methyltransferase 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0863 9 L Replication, recombination and repair (L) DNA modification methylase
COG1715 1 V Defense mechanisms (V) Restriction endonuclease Mrr

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K00571 8 site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72] - -
K07448 1 restriction system protein - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01555 10 DNA methylase
PF04471 1 Restriction endonuclease

Annotations of the 35 SwissProt hits

Annotation Number of occurrences
DNA adenine methyltransferase YhdJ 1
DNA methyltransferase CcrM 12
Orphan methyltransferase M.BamHII 1
Probable type III restriction-modification enzyme HindVI Mod subunit 1
Putative methylase YubD 1
Type II beta methyltransferase M.BslI 1
Type II methyltransferase M.BamHI 1
Type II methyltransferase M.BglI 1
Type II methyltransferase M.BglII 1
Type II methyltransferase M.CfrBI 1
Type II methyltransferase M.EcaI 1
Type II methyltransferase M.HindIII 1
Type II methyltransferase M.HinfI 1
Type II methyltransferase M.HpaI 1
Type II methyltransferase M.MjaII 1
Type II methyltransferase M.MjaV 1
Type II methyltransferase M.MvaI 1
Type II methyltransferase M.RsrI 1
Type II methyltransferase M.ScaI 1
Type II methyltransferase M.SfiI 1
Type II methyltransferase M1.MboII 1
Type II methyltransferase M2.DpnII 1
Type II methyltransferase M2.LlaDCHI 1
Type II methyltransferase M2.MboI 1

Protein length

Min length 346
Max length 781
Mean length (sd) 410.2 (139.6)
Median length 352.0

Protein length distribution