Homologs in group_133

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9 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_13170 FBDBKF_13170 25.8 Morganella morganii S1 - Methyltransferase
EHELCC_19515 EHELCC_19515 25.8 Morganella morganii S2 - Methyltransferase
NLDBIP_09250 NLDBIP_09250 25.8 Morganella morganii S4 - Methyltransferase
NLDBIP_19070 NLDBIP_19070 25.5 Morganella morganii S4 - Methyltransferase
LHKJJB_05015 LHKJJB_05015 25.8 Morganella morganii S3 - Methyltransferase
LHKJJB_18960 LHKJJB_18960 25.5 Morganella morganii S3 - Methyltransferase
HKOGLL_05900 HKOGLL_05900 25.8 Morganella morganii S5 - Methyltransferase
F4V73_RS02045 F4V73_RS02045 27.6 Morganella psychrotolerans - site-specific DNA-methyltransferase
PMI_RS15540 PMI_RS15540 26.5 Proteus mirabilis HI4320 - restriction endonuclease

Distribution of the homologs in the orthogroup group_133

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_133

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q58843 6.7e-09 62 37 1 78 1 mjaIIM Type II methyltransferase M.MjaII Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
P14827 1.88e-06 53 50 0 55 1 ecaIM Type II methyltransferase M.EcaI Enterobacter cloacae
P23192 5.5e-06 51 51 0 47 1 mboIIM Type II methyltransferase M1.MboII Moraxella bovis
P43871 6.41e-06 51 48 0 45 1 hindIIIM Type II methyltransferase M.HindIII Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q9S4X2 1.72e-05 49 42 1 52 3 yubD Putative methylase YubD Escherichia coli (strain K12)
P14244 0.000228 47 35 2 67 3 mvaIM Type II methyltransferase M.MvaI Kocuria varians
P29538 0.000241 47 32 1 77 3 hpaIM Type II methyltransferase M.HpaI Haemophilus parainfluenzae

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS15545
Feature type CDS
Gene -
Product DNA methyltransferase
Location 3458799 - 3460334 (strand: -1)
Length 1536 (nucleotides) / 511 (amino acids)
In genomic island GI63

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_133
Orthogroup size 10
N. genomes 7

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Genomic region

Domains

PF01555 DNA methylase

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0863 Replication, recombination and repair (L) L DNA modification methylase

Protein Sequence

MKDLKDLKNLLKATKPNHDYPAGLIHPYWARKPINITELLVEKLSNPGDLVVDPFMGSGTSLIAALKLNRRTIGSDLSPISNLLVSTILSTTDSSTHLKGILSSAFEEWRSYAIEIYKTTDGLCVERESFNVEGSYVGGNFRLVNCEVKIKPIVNNNLKGKVLICDNIIYSCKDDELNITNPLDFERIEFVENTRIAVHNGVKASDFFTNRNKSFINHCLLYIRKTEFTESERNFLKIFLSSMLPLLRLSDKKASSQWPYWRPKKELTSRNPIVALNKRNKAFIDFLNWSEKELAETQCTHETFNVPADRLIDIALEDSTVDLIITDPPYADHAPYLEYSDFYWSIIDETRTKDLWKFEIVKTNAVGRNIDSNDYDIRMMNSFKSILKGLKDDGYFAFFYLDKNIKHWKTIKRSIIESNCVFEDVIAIPKQRRSMKAVTSPGKTLDGDLIVICRKSASKLKNQRKITLDDALIQLSEGTYFDRFAEFIKIYLVNEVTGIDEKIEKDISRII

Flanking regions ( +/- flanking 50bp)

GGACAAGCGAGACATAAAAACGTAACAGAATACTTATTCCTAATATCAAAATGAAAGATTTAAAAGATTTAAAAAATTTACTGAAGGCGACTAAGCCAAATCATGATTATCCCGCAGGATTAATCCATCCTTATTGGGCAAGAAAACCAATCAATATAACCGAGTTATTAGTTGAAAAATTAAGTAACCCAGGAGATTTAGTAGTAGATCCATTTATGGGATCAGGGACATCATTGATCGCAGCCTTGAAGTTAAACAGAAGAACTATCGGATCCGATCTCAGCCCTATATCCAACTTATTAGTAAGTACCATACTTTCAACGACAGATTCATCTACTCATTTAAAGGGTATATTATCATCAGCTTTTGAAGAGTGGAGAAGTTATGCTATAGAGATATATAAAACTACAGATGGATTATGTGTTGAAAGGGAGTCTTTCAATGTTGAAGGTAGCTATGTAGGTGGAAATTTTAGATTAGTTAATTGTGAGGTGAAAATAAAACCTATCGTAAATAACAATCTAAAAGGAAAGGTTCTCATTTGCGACAATATTATATACTCATGTAAAGATGATGAACTAAATATAACTAACCCTTTAGACTTTGAACGCATTGAGTTTGTAGAAAATACAAGAATAGCTGTTCATAATGGTGTGAAAGCTTCTGATTTTTTTACTAATAGAAATAAGTCATTTATTAATCACTGTCTCTTATACATTCGAAAAACAGAGTTTACTGAGAGTGAAAGAAATTTCTTAAAGATTTTTTTATCCTCTATGCTTCCTTTACTACGATTAAGTGATAAAAAGGCAAGTTCACAATGGCCTTACTGGCGACCTAAAAAAGAACTTACATCAAGAAACCCGATAGTCGCTTTAAATAAAAGAAATAAAGCTTTTATTGATTTTTTAAATTGGTCCGAAAAGGAATTGGCCGAAACCCAATGTACTCATGAAACATTTAATGTTCCAGCTGATAGATTAATAGACATTGCTCTTGAAGATAGCACCGTTGATCTTATAATCACAGATCCGCCATATGCTGATCATGCGCCTTATTTAGAATATTCTGATTTTTATTGGTCAATAATTGATGAAACAAGAACAAAAGATTTATGGAAATTCGAAATTGTAAAAACAAATGCTGTAGGTCGAAATATTGACTCTAATGATTACGATATAAGAATGATGAATTCTTTTAAATCTATATTAAAAGGATTAAAAGATGATGGTTACTTTGCTTTTTTCTATTTAGACAAGAATATCAAGCACTGGAAAACTATAAAGCGGTCAATTATCGAATCAAATTGCGTTTTTGAAGATGTAATCGCGATACCTAAACAACGTAGATCCATGAAAGCTGTTACATCTCCAGGAAAAACATTAGATGGAGACTTAATTGTAATTTGTAGGAAAAGTGCTTCTAAATTAAAGAATCAGAGAAAAATCACTTTAGATGATGCTCTAATTCAACTATCTGAAGGAACATACTTCGATAGGTTTGCTGAATTTATTAAAATTTATCTAGTAAATGAAGTTACTGGTATTGATGAAAAAATAGAAAAAGACATATCAAGGATAATATAAATGTATTGGCTTTTTTCAAAAGAAAAACAAAAAGCAGTCAGAGAAAAAAT