Orthogroup:group_1327


Homologs in group_1327

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_08215 FBDBKF_08215 Morganella morganii S1 rho transcription termination factor Rho
EHELCC_13310 EHELCC_13310 Morganella morganii S2 rho transcription termination factor Rho
NLDBIP_13650 NLDBIP_13650 Morganella morganii S4 rho transcription termination factor Rho
LHKJJB_12905 LHKJJB_12905 Morganella morganii S3 rho transcription termination factor Rho
HKOGLL_12125 HKOGLL_12125 Morganella morganii S5 rho transcription termination factor Rho
F4V73_RS18765 F4V73_RS18765 Morganella psychrotolerans rho transcription termination factor Rho
PMI_RS16475 PMI_RS16475 Proteus mirabilis HI4320 rho transcription termination factor Rho

Distribution of group_1327 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1327 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1327

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1327.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rho 7

Product

# Product Occurence
1 transcription termination factor Rho 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1158 7 K Transcription (K) Transcription termination factor Rho

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03628 7 transcription termination factor Rho RNA degradation -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00006 7 ATP synthase alpha/beta family, nucleotide-binding domain
PF07497 7 Rho termination factor, RNA-binding domain
PF07498 7 Rho termination factor, N-terminal domain

Annotations of the 207 SwissProt hits

Annotation Number of occurrences
ATP synthase subunit alpha 8
ATP synthase subunit alpha 1 10
ATP synthase subunit alpha 2 6
ATP synthase subunit alpha, chloroplastic 1
ATP synthase subunit beta 93
ATP synthase subunit beta 1 5
ATP synthase subunit beta 2 1
ATP synthase subunit beta, mitochondrial 2
Flagellum-specific ATP synthase 14
SPI-1 type 3 secretion system ATPase 2
SPI-2 type 3 secretion system ATPase 1
Transcription termination factor Rho 45
Transcription termination factor Rho (Fragment) 1
Transcription termination factor Rho 1 1
Transcription termination factor Rho 2 1
Type 3 secretion system ATPase 10
V-type ATP synthase alpha chain 5
V-type ATP synthase alpha chain 2 1

Protein length

Unique protein length 419

Protein length distribution