Orthogroup:group_1314


Homologs in group_1314

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_08095 FBDBKF_08095 Morganella morganii S1 hemL glutamate-1-semialdehyde 2,1-aminomutase
EHELCC_13925 EHELCC_13925 Morganella morganii S2 hemL glutamate-1-semialdehyde 2,1-aminomutase
NLDBIP_14370 NLDBIP_14370 Morganella morganii S4 hemL glutamate-1-semialdehyde 2,1-aminomutase
LHKJJB_08480 LHKJJB_08480 Morganella morganii S3 hemL glutamate-1-semialdehyde 2,1-aminomutase
HKOGLL_08030 HKOGLL_08030 Morganella morganii S5 hemL glutamate-1-semialdehyde 2,1-aminomutase
F4V73_RS12905 F4V73_RS12905 Morganella psychrotolerans hemL glutamate-1-semialdehyde 2,1-aminomutase
PMI_RS00985 PMI_RS00985 Proteus mirabilis HI4320 hemL glutamate-1-semialdehyde 2,1-aminomutase

Distribution of group_1314 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1314 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1314

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1314.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 hemL 7

Product

# Product Occurence
1 glutamate-1-semialdehyde 2,1-aminomutase 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0001 7 H Coenzyme transport and metabolism (H) Glutamate-1-semialdehyde aminotransferase

Kegg Ortholog Annotation(s)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00202 7 Aminotransferase class-III

Virulence factor Annotation(s)

VF gene ID Occurences Protein VF ID Category
VFG013203 1 glutamate-1-semialdehyde 2,1-aminomutase VF0758 Nutritional/Metabolic factor
VFG013618 6 glutamate-1-semialdehyde 2,1-aminomutase VF0758 Nutritional/Metabolic factor

Annotations of the 505 SwissProt hits

Annotation Number of occurrences
Glutamate-1-semialdehyde 2,1-aminomutase 411
Glutamate-1-semialdehyde 2,1-aminomutase 1 51
Glutamate-1-semialdehyde 2,1-aminomutase 1, chloroplastic 1
Glutamate-1-semialdehyde 2,1-aminomutase 2 34
Glutamate-1-semialdehyde 2,1-aminomutase 2, chloroplastic 1
Glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic 7

Protein length

Min length 426
Max length 428
Mean length (sd) 426.3 (0.8)
Median length 426.0

Protein length distribution