Orthogroup:group_1278


Homologs in group_1278

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_07095 FBDBKF_07095 Morganella morganii S1 lrp leucine-responsive transcriptional regulator Lrp
EHELCC_03875 EHELCC_03875 Morganella morganii S2 lrp leucine-responsive transcriptional regulator Lrp
NLDBIP_03875 NLDBIP_03875 Morganella morganii S4 lrp leucine-responsive transcriptional regulator Lrp
LHKJJB_09705 LHKJJB_09705 Morganella morganii S3 lrp leucine-responsive transcriptional regulator Lrp
HKOGLL_09270 HKOGLL_09270 Morganella morganii S5 lrp leucine-responsive transcriptional regulator Lrp
F4V73_RS01280 F4V73_RS01280 Morganella psychrotolerans lrp leucine-responsive transcriptional regulator Lrp
PMI_RS03425 PMI_RS03425 Proteus mirabilis HI4320 lrp leucine-responsive transcriptional regulator Lrp

Distribution of group_1278 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1278 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1278

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1278.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 lrp 7

Product

# Product Occurence
1 leucine-responsive transcriptional regulator Lrp 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1522 7 K Transcription (K) DNA-binding transcriptional regulator, Lrp family

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03719 7 Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01037 7 Lrp/AsnC ligand binding domain
PF13412 7 Winged helix-turn-helix DNA-binding

Annotations of the 59 SwissProt hits

Annotation Number of occurrences
Bkd operon transcriptional regulator 2
DNA-binding transcriptional activator DecR 3
Glutamate uptake regulatory protein 2
HTH-type transcriptional regulator FL11 3
HTH-type transcriptional regulator Lrp 1
HTH-type transcriptional regulator LrpA 3
HTH-type transcriptional regulator LrpB 1
HTH-type transcriptional regulator LrpC 1
HTH-type transcriptional regulator Ptr1 1
HTH-type transcriptional regulator Ptr2 1
HTH-type transcriptional regulator Zrp 2
Leucine-responsive regulatory protein 10
Proline dehydrogenase transcriptional activator 2
Regulatory protein AsnC 5
Transcriptional regulator AzlB 1
Transcriptional regulatory protein DoeX 1
Uncharacterized HTH-type transcriptional regulator HI_0224 1
Uncharacterized HTH-type transcriptional regulator PF0054 1
Uncharacterized HTH-type transcriptional regulator PF0250 1
Uncharacterized HTH-type transcriptional regulator PF0864 1
Uncharacterized HTH-type transcriptional regulator PF1231 1
Uncharacterized HTH-type transcriptional regulator PF1734 1
Uncharacterized HTH-type transcriptional regulator PH0045 1
Uncharacterized HTH-type transcriptional regulator PH0140 1
Uncharacterized HTH-type transcriptional regulator PH1055 1
Uncharacterized HTH-type transcriptional regulator PH1692 1
Uncharacterized HTH-type transcriptional regulator PH1916 1
Uncharacterized HTH-type transcriptional regulator PYRAB00550 1
Uncharacterized HTH-type transcriptional regulator PYRAB01370 1
Uncharacterized HTH-type transcriptional regulator PYRAB04820 1
Uncharacterized HTH-type transcriptional regulator PYRAB16920 1
Uncharacterized HTH-type transcriptional regulator YezC 1
Uncharacterized HTH-type transcriptional regulator YugG 1
Uncharacterized HTH-type transcriptional regulator YwrC 1
Uncharacterized HTH-type transcriptional regulator y4sM 1
Uncharacterized HTH-type transcriptional regulator y4tD 1

Protein length

Unique protein length 164

Protein length distribution