Orthogroup:group_1272



Homologs in group_1272

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_07520 FBDBKF_07520 Morganella morganii S1 ycjR Sugar phosphate isomerase/epimerase
EHELCC_17190 EHELCC_17190 Morganella morganii S2 ycjR Sugar phosphate isomerase/epimerase
NLDBIP_13795 NLDBIP_13795 Morganella morganii S4 ycjR Sugar phosphate isomerase/epimerase
LHKJJB_09055 LHKJJB_09055 Morganella morganii S3 ycjR Sugar phosphate isomerase/epimerase
HKOGLL_08605 HKOGLL_08605 Morganella morganii S5 ycjR Sugar phosphate isomerase/epimerase
F4V73_RS13595 F4V73_RS13595 Morganella psychrotolerans - TIM barrel protein
PMI_RS17065 PMI_RS17065 Proteus mirabilis HI4320 - sugar phosphate isomerase/epimerase family protein

Distribution of group_1272 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1272 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1272

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1272.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 ycjR 5
2 - 2

Product

# Product Occurence
1 Sugar phosphate isomerase/epimerase 5
2 TIM barrel protein 1
3 sugar phosphate isomerase/epimerase family protein 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1082 7 G Carbohydrate transport and metabolism (G) Sugar phosphate isomerase/epimerase

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K23248 1 3-oxoisoapionate decarboxylase [EC:4.1.1.120] - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01261 7 Xylose isomerase-like TIM barrel

Annotations of the 2 SwissProt hits

Annotation Number of occurrences
3-oxo-isoapionate decarboxylase 1
Uncharacterized protein YihM 1

Protein length

Min length 320
Max length 324
Mean length (sd) 323.3 (1.5)
Median length 324.0

Protein length distribution