Orthogroup:group_1265


Homologs in group_1265

Help

7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_07005 FBDBKF_07005 Morganella morganii S1 artM arginine ABC transporter permease ArtM
EHELCC_03965 EHELCC_03965 Morganella morganii S2 artM arginine ABC transporter permease ArtM
NLDBIP_03965 NLDBIP_03965 Morganella morganii S4 artM arginine ABC transporter permease ArtM
LHKJJB_09795 LHKJJB_09795 Morganella morganii S3 artM arginine ABC transporter permease ArtM
HKOGLL_09180 HKOGLL_09180 Morganella morganii S5 artM arginine ABC transporter permease ArtM
F4V73_RS01195 F4V73_RS01195 Morganella psychrotolerans artM arginine ABC transporter permease ArtM
PMI_RS03340 PMI_RS03340 Proteus mirabilis HI4320 artM arginine ABC transporter permease ArtM

Distribution of group_1265 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of group_1265 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1265

Orthogroup content: 7 members

Help

This page summarizes the annotation of all members of the orthologous group group_1265.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 artM 7

Product

# Product Occurence
1 arginine ABC transporter permease ArtM 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG4160 7 E Amino acid transport and metabolism (E) ABC-type arginine/histidine transport system, permease component

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K09998 7 arginine transport system permease protein ABC transporters -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00528 7 Binding-protein-dependent transport system inner membrane component

Annotations of the 63 SwissProt hits

Annotation Number of occurrences
Arginine ABC transporter permease protein ArtM 5
Arginine ABC transporter permease protein ArtQ 4
Arginine transport system permease protein ArgU 1
Arginine transport system permease protein ArtQ 1
General L-amino acid transport system permease protein AapM 1
General L-amino acid transport system permease protein AapQ 1
Glutamate transport system permease protein GluC 1
Glutamate transport system permease protein GluD 2
Glutamate/aspartate import permease protein GltJ 2
Glutamate/aspartate import permease protein GltK 3
Glutamate/glutamine/aspartate/asparagine transport system permease protein BztC 1
Glutamine transport system permease protein GlnP 4
Histidine/lysine/arginine/ornithine transport system permease protein HisM 6
Histidine/lysine/arginine/ornithine transport system permease protein HisQ 3
Inner membrane amino-acid ABC transporter permease protein YhdY 1
L-cystine transport system permease protein TcyB 1
L-cystine transport system permease protein TcyL 4
L-cystine transport system permease protein TcyM 1
Nopaline transport system permease protein NocM 1
Nopaline transport system permease protein NocQ 1
Octopine transport system permease protein OccM 2
Octopine transport system permease protein OccQ 3
Probable amino-acid ABC transporter permease protein HI_0179 1
Probable amino-acid ABC transporter permease protein PatM 1
Probable amino-acid ABC transporter permease protein YckA 1
Probable amino-acid ABC transporter permease protein y4tF 1
Probable amino-acid ABC transporter permease protein y4tG 1
Probable amino-acid permease protein YxeN 1
Probable glutamine ABC transporter permease protein GlnM 1
Probable glutamine ABC transporter permease protein GlnP 1
Putative amino-acid ABC transporter permease protein YhdX 1
Putative glutamine transport system permease protein GlnP 5

Protein length

Min length 222
Max length 224
Mean length (sd) 223.4 (1.0)
Median length 224.0

Protein length distribution