Orthogroup:group_1235



Homologs in group_1235

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_07190 FBDBKF_07190 Morganella morganii S1 trm112 RNA methyltransferase activator Trm112/YbaR
EHELCC_03780 EHELCC_03780 Morganella morganii S2 trm112 RNA methyltransferase activator Trm112/YbaR
NLDBIP_03780 NLDBIP_03780 Morganella morganii S4 trm112 RNA methyltransferase activator Trm112/YbaR
LHKJJB_09610 LHKJJB_09610 Morganella morganii S3 trm112 RNA methyltransferase activator Trm112/YbaR
HKOGLL_09365 HKOGLL_09365 Morganella morganii S5 trm112 RNA methyltransferase activator Trm112/YbaR
F4V73_RS01375 F4V73_RS01375 Morganella psychrotolerans - Trm112 family protein
PMI_RS03545 PMI_RS03545 Proteus mirabilis HI4320 - Trm112 family protein

Distribution of group_1235 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1235 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1235

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1235.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 trm112 5
2 - 2

Product

# Product Occurence
1 RNA methyltransferase activator Trm112/YbaR 5
2 Trm112 family protein 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG2835 7 J Translation, ribosomal structure and biogenesis (J) RNA methyltransferase activator Trm112/YbaR

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K09791 7 uncharacterized protein - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF03966 7 Trm112p-like protein

Annotations of the 281 SwissProt hits

Annotation Number of occurrences
Protein preY, mitochondrial 3
Tetraacyldisaccharide 4'-kinase 3
UPF0434 protein ABO_2103 1
UPF0434 protein AHA_2776 1
UPF0434 protein AM070 1
UPF0434 protein APH_0052 1
UPF0434 protein ASA_1553 1
UPF0434 protein Aave_2563 1
UPF0434 protein Ajs_2306 1
UPF0434 protein Arad_4458 1
UPF0434 protein Atu3696 1
UPF0434 protein Avi_4243 1
UPF0434 protein Avin_14770 1
UPF0434 protein BAB2_0345 1
UPF0434 protein BARBAKC583_1098 1
UPF0434 protein BAV2101 1
UPF0434 protein BAbS19_II03260 1
UPF0434 protein BB2007 1
UPF0434 protein BBta_0300 1
UPF0434 protein BCAN_B0909 1
UPF0434 protein BCI_0256 1
UPF0434 protein BH12860 1
UPF0434 protein BMA10229_A1047 1
UPF0434 protein BMA10247_2152 1
UPF0434 protein BMA2274 1
UPF0434 protein BMASAVP1_A0570 1
UPF0434 protein BMEA_B0871 1
UPF0434 protein BMEII0403 1
UPF0434 protein BOV_A0835 1
UPF0434 protein BP2767 1
UPF0434 protein BPEN_388 1
UPF0434 protein BPP2562 1
UPF0434 protein BPSL0877 1
UPF0434 protein BQ10150 1
UPF0434 protein BRA0891/BS1330_II0884 1
UPF0434 protein BRADO0313 1
UPF0434 protein BSUIS_B0883 1
UPF0434 protein BTH_I0741 1
UPF0434 protein BURPS1106A_0929 1
UPF0434 protein BURPS1710b_1082 1
UPF0434 protein BURPS668_0926 1
UPF0434 protein BamMC406_2464 1
UPF0434 protein Bamb_2594 1
UPF0434 protein BceJ2315_26980 1
UPF0434 protein Bcen2424_2546 1
UPF0434 protein Bcen_1934 1
UPF0434 protein Bcenmc03_2570 1
UPF0434 protein Bcep1808_2639 1
UPF0434 protein Bcep18194_A5877 1
UPF0434 protein Bfl377 1
UPF0434 protein Bmul_0750/BMULJ_02510 1
UPF0434 protein Bpet2671 1
UPF0434 protein Bphy_0537 1
UPF0434 protein Bphyt_3197 1
UPF0434 protein Bpro_2950 1
UPF0434 protein BruAb2_0341 1
UPF0434 protein Bxeno_A3631 1
UPF0434 protein CBUD_1597.1 1
UPF0434 protein CCNA_00107 1
UPF0434 protein CC_0108 1
UPF0434 protein CKO_02153 1
UPF0434 protein COSY_0767 1
UPF0434 protein CPS_2127 1
UPF0434 protein CV_3345 1
UPF0434 protein CbuG_1535 1
UPF0434 protein CbuK_1382 1
UPF0434 protein Csal_1588 1
UPF0434 protein Daci_3569 1
UPF0434 protein Daro_3207 1
UPF0434 protein Dtpsy_1553 1
UPF0434 protein ECA2555 1
UPF0434 protein ECH_0194 1
UPF0434 protein ERGA_CDS_01260 1
UPF0434 protein ESA_02427 1
UPF0434 protein ETA_21370 1
UPF0434 protein Ecaj_0131 1
UPF0434 protein Ent638_1436 1
UPF0434 protein Erum1340/ERWE_CDS_01300 1
UPF0434 protein FTA_1487 1
UPF0434 protein FTF1479c 1
UPF0434 protein FTH_1362 1
UPF0434 protein FTL_1400 1
UPF0434 protein FTM_0733 1
UPF0434 protein FTN_0682 1
UPF0434 protein FTT_1479c 1
UPF0434 protein Fphi_1862 1
UPF0434 protein GDI0182/Gdia_2252 1
UPF0434 protein GOX0764 1
UPF0434 protein GbCGDNIH1_0252 1
UPF0434 protein H16_A0605 1
UPF0434 protein HCH_02705 1
UPF0434 protein HDEF_0234 1
UPF0434 protein HEAR2489 1
UPF0434 protein HNE_3545 1
UPF0434 protein HSM_0997 1
UPF0434 protein HS_0657 1
UPF0434 protein IL1511 1
UPF0434 protein Jann_0424 1
UPF0434 protein KPK_3615 1
UPF0434 protein KPN78578_09190 1
UPF0434 protein LHK_01103 1
UPF0434 protein LPC_1374 1
UPF0434 protein Lcho_2556 1
UPF0434 protein M446_0487 1
UPF0434 protein MADE_1009415 1
UPF0434 protein MCA0634 1
UPF0434 protein MS0934 1
UPF0434 protein Maqu_1739 1
UPF0434 protein Meso_3270 1
UPF0434 protein Mfla_2088 1
UPF0434 protein Mmar10_2939 1
UPF0434 protein Mmc1_0910 1
UPF0434 protein Mmwyl1_2153 1
UPF0434 protein Mnod_1613 1
UPF0434 protein Mpe_A2486 1
UPF0434 protein NGK_0378 1
UPF0434 protein NGO0244 1
UPF0434 protein NGR_c31900 1
UPF0434 protein NMA0874 1
UPF0434 protein NMB0674 1
UPF0434 protein NMC0623 1
UPF0434 protein NMCC_0628 1
UPF0434 protein NT01EI_2448 1
UPF0434 protein Nham_0083 1
UPF0434 protein Nmul_A1027 1
UPF0434 protein Noc_2677 1
UPF0434 protein Nwi_0075 1
UPF0434 protein Oant_3286 1
UPF0434 protein PA14_25520 1
UPF0434 protein PA2980 1
UPF0434 protein PBPRA2383 1
UPF0434 protein PC1_1771 1
UPF0434 protein PFLU_3771 1
UPF0434 protein PFL_1779 1
UPF0434 protein PLES_20821 1
UPF0434 protein PM0859 1
UPF0434 protein PMI0721 1
UPF0434 protein PP_1901 1
UPF0434 protein PSEEN1604 1
UPF0434 protein PSHAa1659 1
UPF0434 protein PSPA7_2181 1
UPF0434 protein PSPPH_1629 1
UPF0434 protein PSPTO_3844 1
UPF0434 protein PST_2635 1
UPF0434 protein Patl_1782 1
UPF0434 protein Pden_2369 1
UPF0434 protein Pfl01_4174 1
UPF0434 protein Ping_0902 1
UPF0434 protein Pmen_1615 1
UPF0434 protein Pnap_1922 1
UPF0434 protein Pnec_0311 1
UPF0434 protein PputGB1_1477 1
UPF0434 protein PputW619_1512 1
UPF0434 protein Pput_3813 1
UPF0434 protein R03186 1
UPF0434 protein RALTA_A0561 1
UPF0434 protein RD1_0037 1
UPF0434 protein RHECIAT_CH0004260 1
UPF0434 protein RHE_CH03977 1
UPF0434 protein RHOS4_00640 1
UPF0434 protein RL4569 1
UPF0434 protein RPA0269 1
UPF0434 protein RPB_0294 1
UPF0434 protein RPC_0266 1
UPF0434 protein RPD_0454 1
UPF0434 protein RPE_0408 1
UPF0434 protein RSKD131_2883 1
UPF0434 protein RSc2531 1
UPF0434 protein Reut_A0592 1
UPF0434 protein Rfer_3156 1
UPF0434 protein Rleg2_3773 1
UPF0434 protein Rmet_0534 1
UPF0434 protein Rpal_0270 1
UPF0434 protein Rpic_2808 1
UPF0434 protein Rsph17025_2896 1
UPF0434 protein Rsph17029_0141 1
UPF0434 protein SG0997 1
UPF0434 protein SO_2800 1
UPF0434 protein SPO3421 1
UPF0434 protein Sama_1339 1
UPF0434 protein Sbal195_1707 1
UPF0434 protein Sbal223_2672 1
UPF0434 protein Sbal_1685 1
UPF0434 protein Sde_1297 1
UPF0434 protein Sden_2197 1
UPF0434 protein Sfri_2386 1
UPF0434 protein Shal_2504 1
UPF0434 protein Shew185_1670 1
UPF0434 protein Shew_1640 1
UPF0434 protein Shewana3_2582 1
UPF0434 protein Shewmr4_2420 1
UPF0434 protein Shewmr7_2490 1
UPF0434 protein Smed_3047 1
UPF0434 protein Spea_1772 1
UPF0434 protein Spro_1718 1
UPF0434 protein Sputcn32_1559 1
UPF0434 protein Sputw3181_2540 1
UPF0434 protein Ssed_2824 1
UPF0434 protein Swoo_1821 1
UPF0434 protein TERTU_2813 1
UPF0434 protein TM1040_0056 1
UPF0434 protein Tbd_1506 1
UPF0434 protein Tcr_0959 1
UPF0434 protein Tgr7_1374 1
UPF0434 protein Tola_2233 1
UPF0434 protein VC0395_A1467/VC395_1991 1
UPF0434 protein VCM66_1800 1
UPF0434 protein VC_1876 1
UPF0434 protein VFMJ11_A0475 1
UPF0434 protein VF_A0426 1
UPF0434 protein VIBHAR_01537 1
UPF0434 protein VS_2060 1
UPF0434 protein VV1_2087 1
UPF0434 protein VV2354 1
UPF0434 protein Vapar_2640 1
UPF0434 protein WIGBR2520 1
UPF0434 protein YE1549 1
UPF0434 protein YPA_0693 1
UPF0434 protein YPDSF_2296 1
UPF0434 protein YPK_2661 1
UPF0434 protein YPN_2578 1
UPF0434 protein YPO1399/y2773.1/YP_1194 1
UPF0434 protein YPTB1424 1
UPF0434 protein YPTS_1526 1
UPF0434 protein YcaR 42
UPF0434 protein YpAngola_A1964 1
UPF0434 protein YpsIP31758_2572 1
UPF0434 protein azo1471 1
UPF0434 protein bsr0601 1
UPF0434 protein lpg1920 1
UPF0434 protein lpl1884 1
UPF0434 protein lpp1895 1
UPF0434 protein mma_2578 1
UPF0434 protein msl4429 1
UPF0434 protein plu1633 1
UPF0434 protein swp_2279 1

Protein length

Min length 58
Max length 59
Mean length (sd) 58.1 (0.4)
Median length 58.0

Protein length distribution