Orthogroup:group_1215


Homologs in group_1215

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_07070 FBDBKF_07070 Morganella morganii S1 infA translation initiation factor IF-1
EHELCC_03900 EHELCC_03900 Morganella morganii S2 infA translation initiation factor IF-1
NLDBIP_03900 NLDBIP_03900 Morganella morganii S4 infA translation initiation factor IF-1
LHKJJB_09730 LHKJJB_09730 Morganella morganii S3 infA translation initiation factor IF-1
HKOGLL_09245 HKOGLL_09245 Morganella morganii S5 infA translation initiation factor IF-1
F4V73_RS01255 F4V73_RS01255 Morganella psychrotolerans infA translation initiation factor IF-1
PMI_RS03400 PMI_RS03400 Proteus mirabilis HI4320 infA translation initiation factor IF-1

Distribution of group_1215 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1215 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1215

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1215.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 infA 7

Product

# Product Occurence
1 translation initiation factor IF-1 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0361 7 J Translation, ribosomal structure and biogenesis (J) Translation initiation factor IF-1

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02518 7 translation initiation factor IF-1 - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01176 7 Translation initiation factor 1A / IF-1

Annotations of the 503 SwissProt hits

Annotation Number of occurrences
Translation initiation factor IF-1 438
Translation initiation factor IF-1 1 22
Translation initiation factor IF-1 2 23
Translation initiation factor IF-1, chloroplastic 19
Translation initiation factor IF-1, plastid 1

Protein length

Unique protein length 72

Protein length distribution