Orthogroup:group_1148


Homologs in group_1148

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_06575 FBDBKF_06575 Morganella morganii S1 trpR trp operon repressor
EHELCC_09620 EHELCC_09620 Morganella morganii S2 trpR trp operon repressor
NLDBIP_10000 NLDBIP_10000 Morganella morganii S4 trpR trp operon repressor
LHKJJB_07755 LHKJJB_07755 Morganella morganii S3 trpR trp operon repressor
HKOGLL_07305 HKOGLL_07305 Morganella morganii S5 trpR trp operon repressor
F4V73_RS15365 F4V73_RS15365 Morganella psychrotolerans trpR trp operon repressor
PMI_RS18480 PMI_RS18480 Proteus mirabilis HI4320 trpR trp operon repressor

Distribution of group_1148 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1148 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1148

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1148.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 trpR 7

Product

# Product Occurence
1 trp operon repressor 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG2973 7 K Transcription (K) Trp operon repressor

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03720 7 TrpR family transcriptional regulator, trp operon repressor - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01371 7 Trp repressor protein

Annotations of the 84 SwissProt hits

Annotation Number of occurrences
Trp operon repressor 56
Trp operon repressor homolog 28

Protein length

Min length 101
Max length 107
Mean length (sd) 102.1 (2.3)
Median length 101.0

Protein length distribution