Orthogroup:group_1132


Homologs in group_1132

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_06460 FBDBKF_06460 Morganella morganii S1 rpsT 30S ribosomal protein S20
EHELCC_09505 EHELCC_09505 Morganella morganii S2 rpsT 30S ribosomal protein S20
NLDBIP_09885 NLDBIP_09885 Morganella morganii S4 rpsT 30S ribosomal protein S20
LHKJJB_07870 LHKJJB_07870 Morganella morganii S3 rpsT 30S ribosomal protein S20
HKOGLL_07420 HKOGLL_07420 Morganella morganii S5 rpsT 30S ribosomal protein S20
F4V73_RS15465 F4V73_RS15465 Morganella psychrotolerans rpsT 30S ribosomal protein S20
PMI_RS00065 PMI_RS00065 Proteus mirabilis HI4320 rpsT 30S ribosomal protein S20

Distribution of group_1132 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1132 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1132

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1132.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rpsT 7

Product

# Product Occurence
1 30S ribosomal protein S20 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0268 7 J Translation, ribosomal structure and biogenesis (J) Ribosomal protein S20

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02968 7 small subunit ribosomal protein S20 Ribosome -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01649 7 Ribosomal protein S20

Annotations of the 531 SwissProt hits

Annotation Number of occurrences
Small ribosomal subunit protein bS20 524
Small ribosomal subunit protein bS20 (Fragment) 5
Small ribosomal subunit protein bS20c 2

Protein length

Unique protein length 86

Protein length distribution