COG2171


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG2171, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Tetrahydrodipicolinate N-succinyltransferase
Function(s) descr. Amino acid transport and metabolism (E)

Occurence in the database

COG2171 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1065 FBDBKF_06035 33530 34354 1 dapD 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase Morganella morganii S1
1 group_1065 EHELCC_09080 34102 34926 1 dapD 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase Morganella morganii S2
2 group_1065 NLDBIP_09460 34102 34926 1 dapD 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase Morganella morganii S4
3 group_1065 LHKJJB_08295 182312 183136 -1 dapD 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase Morganella morganii S3
4 group_1065 HKOGLL_07845 182312 183136 -1 dapD 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase Morganella morganii S5
5 group_1065 F4V73_RS15870 179551 180375 -1 dapD 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase Morganella psychrotolerans
6 group_1065 PMI_RS11300 2488534 2489358 1 dapD 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase Proteus mirabilis HI4320