Orthogroup:group_1125


Homologs in group_1125

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_06425 FBDBKF_06425 Morganella morganii S1 carA carbamoyl phosphate synthase small subunit
EHELCC_09470 EHELCC_09470 Morganella morganii S2 carA carbamoyl phosphate synthase small subunit
NLDBIP_09850 NLDBIP_09850 Morganella morganii S4 carA carbamoyl phosphate synthase small subunit
LHKJJB_07905 LHKJJB_07905 Morganella morganii S3 carA carbamoyl phosphate synthase small subunit
HKOGLL_07455 HKOGLL_07455 Morganella morganii S5 carA carbamoyl phosphate synthase small subunit
F4V73_RS15500 F4V73_RS15500 Morganella psychrotolerans carA glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
PMI_RS00100 PMI_RS00100 Proteus mirabilis HI4320 carA glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit

Distribution of group_1125 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1125 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1125

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1125.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 carA 7

Product

# Product Occurence
1 carbamoyl phosphate synthase small subunit 5
2 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0505 7 EF Amino acid transport and metabolism (E)
Nucleotide transport and metabolism (F)		 Carbamoylphosphate synthase small subunit

Kegg Ortholog Annotation(s)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00117 7 Glutamine amidotransferase class-I
PF00988 7 Carbamoyl-phosphate synthase small chain, CPSase domain

Annotations of the 531 SwissProt hits

Annotation Number of occurrences
Aminodeoxychorismate synthase 3
Aminodeoxychorismate synthase component 2 4
Aminodeoxychorismate synthase, chloroplastic 2
Aminodeoxychorismate/anthranilate synthase component 2 1
Anthranilate synthase 2
Anthranilate synthase beta subunit 1, chloroplastic 2
Anthranilate synthase beta subunit 2, chloroplastic 2
Anthranilate synthase component 2 26
Anthranilate synthase component 2 (Fragment) 1
Anthranilate synthase component II 1
Anthranilate synthase component II (Fragment) 1
Bifunctional protein TrpGD 3
Carbamoyl phosphate synthase arginine-specific small chain 23
Carbamoyl phosphate synthase pyrimidine-specific small chain 3
Carbamoyl phosphate synthase small chain 172
Carbamoyl phosphate synthase small chain, chloroplastic 2
Carbamoyl-phosphate synthase [ammonia], mitochondrial 4
GMP synthase [glutamine-hydrolyzing] 226
GMP synthase [glutamine-hydrolyzing] subunit A 28
Multifunctional protein CAD 4
Multifunctional protein URA2 1
Multifunctional protein pyr-1 1
Multifunctional protein pyr-3 1
Multifunctional protein pyr1-3 1
Multifunctional protein pyrABCN 1
Multifunctional protein r 1
Multifunctional protein ura1 1
Multifunctional tryptophan biosynthesis protein 8
Multifunctional tryptophan biosynthesis protein (Fragment) 1
Probable GMP synthase [glutamine-hydrolyzing] 1
Probable aminodeoxychorismate synthase, chloroplastic 1
Putative GMP synthase [glutamine-hydrolyzing] 1
Putative aminodeoxychorismate synthase 1
Putative anthranilate synthase component II 1

Protein length

Min length 379
Max length 387
Mean length (sd) 380.1 (3.0)
Median length 379.0

Protein length distribution