COG0743


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0743, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description 1-deoxy-D-xylulose 5-phosphate reductoisomerase
Function(s) descr. Lipid transport and metabolism (I)

Occurence in the database

COG0743 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1058 FBDBKF_05990 24211 25407 -1 ispC 1-deoxy-D-xylulose-5-phosphate reductoisomerase Morganella morganii S1
1 group_1058 EHELCC_09035 24783 25979 -1 ispC 1-deoxy-D-xylulose-5-phosphate reductoisomerase Morganella morganii S2
2 group_1058 NLDBIP_09415 24783 25979 -1 ispC 1-deoxy-D-xylulose-5-phosphate reductoisomerase Morganella morganii S4
3 group_1058 LHKJJB_08340 191259 192455 1 ispC 1-deoxy-D-xylulose-5-phosphate reductoisomerase Morganella morganii S3
4 group_1058 HKOGLL_07890 191259 192455 1 ispC 1-deoxy-D-xylulose-5-phosphate reductoisomerase Morganella morganii S5
5 group_1058 F4V73_RS15905 187871 189067 1 ispC 1-deoxy-D-xylulose-5-phosphate reductoisomerase Morganella psychrotolerans
6 group_1058 PMI_RS11265 2479749 2480942 -1 ispC 1-deoxy-D-xylulose-5-phosphate reductoisomerase Proteus mirabilis HI4320