Orthogroup:group_1114


Homologs in group_1114

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_06355 FBDBKF_06355 Morganella morganii S1 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase
EHELCC_09400 EHELCC_09400 Morganella morganii S2 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase
NLDBIP_09780 NLDBIP_09780 Morganella morganii S4 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase
LHKJJB_07975 LHKJJB_07975 Morganella morganii S3 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase
HKOGLL_07525 HKOGLL_07525 Morganella morganii S5 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase
F4V73_RS15570 F4V73_RS15570 Morganella psychrotolerans ribB 3,4-dihydroxy-2-butanone-4-phosphate synthase
PMI_RS11640 PMI_RS11640 Proteus mirabilis HI4320 ribB 3,4-dihydroxy-2-butanone-4-phosphate synthase

Distribution of group_1114 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1114 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1114

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1114.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 ribB 7

Product

# Product Occurence
1 3,4-dihydroxy-2-butanone 4-phosphate synthase 5
2 3,4-dihydroxy-2-butanone-4-phosphate synthase 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0108 7 H Coenzyme transport and metabolism (H) 3,4-dihydroxy-2-butanone 4-phosphate synthase

Kegg Ortholog Annotation(s)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00926 7 3,4-dihydroxy-2-butanone 4-phosphate synthase

Annotations of the 249 SwissProt hits

Annotation Number of occurrences
3,4-dihydroxy-2-butanone 4-phosphate synthase 162
Bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic 1
GTP cyclohydrolase-2 1
Monofunctional riboflavin biosynthesis protein RIBA 2, chloroplastic 1
Monofunctional riboflavin biosynthesis protein RIBA 3, chloroplastic 1
Probable bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic 1
Probable bifunctional riboflavin biosynthesis protein RIBA 2, chloroplastic 1
Probable monofunctional riboflavin biosynthesis protein RIBA 3, chloroplastic 1
Riboflavin biosynthesis protein RibBA 80

Protein length

Unique protein length 217

Protein length distribution