Orthogroup:group_1095


Homologs in group_1095

Help

7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_06225 FBDBKF_06225 Morganella morganii S1 polB DNA polymerase II
EHELCC_09270 EHELCC_09270 Morganella morganii S2 polB DNA polymerase II
NLDBIP_09650 NLDBIP_09650 Morganella morganii S4 polB DNA polymerase II
LHKJJB_08105 LHKJJB_08105 Morganella morganii S3 polB DNA polymerase II
HKOGLL_07655 HKOGLL_07655 Morganella morganii S5 polB DNA polymerase II
F4V73_RS15690 F4V73_RS15690 Morganella psychrotolerans - DNA polymerase II
PMI_RS11510 PMI_RS11510 Proteus mirabilis HI4320 - DNA polymerase II

Distribution of group_1095 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of group_1095 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1095

Orthogroup content: 7 members

Help

This page summarizes the annotation of all members of the orthologous group group_1095.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 polB 5
2 - 2

Product

# Product Occurence
1 DNA polymerase II 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0417 7 L Replication, recombination and repair (L) DNA polymerase B elongation subunit

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02336 7 DNA polymerase II [EC:2.7.7.7] - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00136 7 DNA polymerase family B
PF03104 2 DNA polymerase family B, exonuclease domain
PF21474 7 DNA polymerase II, N-terminal
PF22587 7 DNA polymerase II, insertion domain

Annotations of the 124 SwissProt hits

Annotation Number of occurrences
DNA polymerase 24
DNA polymerase (Fragment) 1
DNA polymerase 1 6
DNA polymerase 120R 1
DNA polymerase 2 2
DNA polymerase 3 2
DNA polymerase II 1
DNA polymerase PolB subunit 1 1
DNA polymerase PolB subunit 2 1
DNA polymerase alpha catalytic subunit 12
DNA polymerase alpha catalytic subunit (Fragment) 1
DNA polymerase alpha catalytic subunit A 1
DNA polymerase beta 6
DNA polymerase catalytic subunit 27
DNA polymerase delta catalytic subunit 15
DNA polymerase epsilon catalytic subunit A 12
DNA polymerase epsilon catalytic subunit B 1
DNA polymerase zeta catalytic subunit 6
DNA-directed DNA polymerase 3
Putative DNA polymerase 060R 1

Protein length

Min length 784
Max length 790
Mean length (sd) 789.1 (2.3)
Median length 790.0

Protein length distribution