Orthogroup:group_1092


Homologs in group_1092

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_06210 FBDBKF_06210 Morganella morganii S1 thiB thiamine ABC transporter substrate binding subunit
EHELCC_09255 EHELCC_09255 Morganella morganii S2 thiB thiamine ABC transporter substrate binding subunit
NLDBIP_09635 NLDBIP_09635 Morganella morganii S4 thiB thiamine ABC transporter substrate binding subunit
LHKJJB_08120 LHKJJB_08120 Morganella morganii S3 thiB thiamine ABC transporter substrate binding subunit
HKOGLL_07670 HKOGLL_07670 Morganella morganii S5 thiB thiamine ABC transporter substrate binding subunit
F4V73_RS15705 F4V73_RS15705 Morganella psychrotolerans thiB thiamine ABC transporter substrate binding subunit
PMI_RS11485 PMI_RS11485 Proteus mirabilis HI4320 thiB thiamine ABC transporter substrate binding subunit

Distribution of group_1092 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1092 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1092

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1092.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 thiB 7

Product

# Product Occurence
1 thiamine ABC transporter substrate binding subunit 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG4143 7 H Coenzyme transport and metabolism (H) ABC-type thiamine transport system, periplasmic component TbpA

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02064 7 thiamine transport system substrate-binding protein ABC transporters -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01547 7 Bacterial extracellular solute-binding protein

Annotations of the 10 SwissProt hits

Annotation Number of occurrences
Fe(3+)-binding periplasmic protein 1
Iron deficiency-induced protein A 1
Iron uptake protein A1 1
Thiamine-binding periplasmic protein 7

Protein length

Min length 321
Max length 338
Mean length (sd) 334.1 (5.8)
Median length 336.0

Protein length distribution