Orthogroup:group_105


Homologs in group_105

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11 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_00060 FBDBKF_00060 Morganella morganii S1 - Tape measure domain-containing protein
FBDBKF_11485 FBDBKF_11485 Morganella morganii S1 - tape measure protein
EHELCC_01485 EHELCC_01485 Morganella morganii S2 - Tape measure domain-containing protein
EHELCC_17730 EHELCC_17730 Morganella morganii S2 - tape measure protein
NLDBIP_01975 NLDBIP_01975 Morganella morganii S4 - Tape measure domain-containing protein
NLDBIP_05060 NLDBIP_05060 Morganella morganii S4 - tape measure protein
LHKJJB_00060 LHKJJB_00060 Morganella morganii S3 - Tape measure domain-containing protein
LHKJJB_19175 LHKJJB_19175 Morganella morganii S3 - tape measure protein
HKOGLL_00100 HKOGLL_00100 Morganella morganii S5 - Tape measure domain-containing protein
HKOGLL_15320 HKOGLL_15320 Morganella morganii S5 - tape measure protein
PMI_RS04590 PMI_RS04590 Proteus mirabilis HI4320 - phage tail tape measure protein

Distribution of group_105 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_105 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_105

Orthogroup content: 11 members

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This page summarizes the annotation of all members of the orthologous group group_105.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 - 11

Product

# Product Occurence
1 Tape measure domain-containing protein 5
2 tape measure protein 5
3 phage tail tape measure protein 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3941 10 X Mobilome: prophages, transposons (X) Phage tail tape-measure protein, controls tail length
COG5281 1 X Mobilome: prophages, transposons (X) Phage-related minor tail protein

Pfam domain Annotation(s)

Domain ID Occurences Description
PF06120 5 Tail length tape measure protein
PF09718 1 Lambda phage tail tape-measure protein (Tape_meas_lam_C)
PF20155 11 Tape measure protein

Annotations of the 3 SwissProt hits

Annotation Number of occurrences
Tape measure protein 3

Protein length

Min length 1091
Max length 1118
Mean length (sd) 1110.5 (8.5)
Median length 1107.0

Protein length distribution