Homologs in group_109

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10 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_00245 FBDBKF_00245 86.1 Morganella morganii S1 - Regulatory protein
FBDBKF_11250 FBDBKF_11250 100.0 Morganella morganii S1 - Regulatory protein
EHELCC_01300 EHELCC_01300 86.1 Morganella morganii S2 - Regulatory protein
EHELCC_17965 EHELCC_17965 100.0 Morganella morganii S2 - Regulatory protein
NLDBIP_02160 NLDBIP_02160 86.1 Morganella morganii S4 - Regulatory protein
NLDBIP_05295 NLDBIP_05295 100.0 Morganella morganii S4 - Regulatory protein
LHKJJB_03675 LHKJJB_03675 86.1 Morganella morganii S3 - Regulatory protein
HKOGLL_03370 HKOGLL_03370 86.1 Morganella morganii S5 - Regulatory protein
HKOGLL_15555 HKOGLL_15555 100.0 Morganella morganii S5 - Regulatory protein
PMI_RS02390 PMI_RS02390 63.0 Proteus mirabilis HI4320 - hypothetical protein

Distribution of the homologs in the orthogroup group_109

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_109

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S3
Locus tag LHKJJB_02175
Feature type CDS
Gene -
Product Regulatory protein
Location 12486 - 12812 (strand: -1)
Length 327 (nucleotides) / 108 (amino acids)

Contig

Accession ZDB_360
Length 302856 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_109
Orthogroup size 11
N. genomes 6

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Genomic region

Protein Sequence

MENANPRKSFNRFVSNHLTATAHQQLRETSQTVVAKLLNVHDSTIMRRAEKFSDCCEVLAASGIRDFVLPGEKKISEEEYRFLWKQIGELSLMRTKENAPAVGAAEAH

Flanking regions ( +/- flanking 50bp)

CTCACAGGAAGTGAGCTAATAACTGTATCTCAATAAGGACATTATGAATTATGGAAAATGCAAATCCACGCAAATCGTTTAACCGGTTTGTGTCAAATCATCTAACCGCCACGGCACATCAGCAATTGCGTGAAACATCCCAAACGGTAGTGGCAAAGCTGCTCAATGTTCACGACTCAACAATCATGCGCAGAGCAGAGAAATTCTCGGATTGCTGCGAAGTATTGGCTGCGTCAGGAATTAGGGATTTTGTTTTGCCAGGCGAGAAGAAAATCAGCGAGGAAGAGTACCGGTTTCTGTGGAAGCAGATCGGCGAACTCTCTCTGATGAGAACAAAAGAAAACGCCCCGGCTGTTGGAGCAGCAGAGGCGCATTAAGAAAAGCACTTAACTTTCACACTGTATCAATAACCAGTGATTTAGGAAAG