Orthogroup:group_1049


Homologs in group_1049

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_05940 FBDBKF_05940 Morganella morganii S1 rnhB ribonuclease HII
EHELCC_08985 EHELCC_08985 Morganella morganii S2 rnhB ribonuclease HII
NLDBIP_09365 NLDBIP_09365 Morganella morganii S4 rnhB ribonuclease HII
LHKJJB_08390 LHKJJB_08390 Morganella morganii S3 rnhB ribonuclease HII
HKOGLL_07940 HKOGLL_07940 Morganella morganii S5 rnhB ribonuclease HII
F4V73_RS15955 F4V73_RS15955 Morganella psychrotolerans rnhB ribonuclease HII
PMI_RS11215 PMI_RS11215 Proteus mirabilis HI4320 rnhB ribonuclease HII

Distribution of group_1049 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1049 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1049

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1049.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rnhB 7

Product

# Product Occurence
1 ribonuclease HII 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0164 7 L Replication, recombination and repair (L) Ribonuclease HII

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03470 7 ribonuclease HII [EC:3.1.26.4] DNA replication -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01351 7 Ribonuclease HII

Annotations of the 538 SwissProt hits

Annotation Number of occurrences
Ribonuclease HII 535
Ribonuclease HII 1 1
Ribonuclease HII 2 2

Protein length

Min length 196
Max length 198
Mean length (sd) 197.7 (0.8)
Median length 198.0

Protein length distribution