Orthogroup:group_1039


Homologs in group_1039

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_05370 FBDBKF_05370 Morganella morganii S1 ychJ Uncharacterized conserved protein YchJ, contains N- and C-terminal SEC-C domains
EHELCC_12220 EHELCC_12220 Morganella morganii S2 ychJ Uncharacterized conserved protein YchJ, contains N- and C-terminal SEC-C domains
NLDBIP_12560 NLDBIP_12560 Morganella morganii S4 ychJ Uncharacterized conserved protein YchJ, contains N- and C-terminal SEC-C domains
LHKJJB_12420 LHKJJB_12420 Morganella morganii S3 ychJ Uncharacterized conserved protein YchJ, contains N- and C-terminal SEC-C domains
HKOGLL_11035 HKOGLL_11035 Morganella morganii S5 ychJ Uncharacterized conserved protein YchJ, contains N- and C-terminal SEC-C domains
F4V73_RS05825 F4V73_RS05825 Morganella psychrotolerans - YchJ family protein
PMI_RS07225 PMI_RS07225 Proteus mirabilis HI4320 - YchJ family protein

Distribution of group_1039 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1039 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1039

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1039.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 ychJ 5
2 - 2

Product

# Product Occurence
1 Uncharacterized conserved protein YchJ, contains N- and C-terminal SEC-C domains 5
2 YchJ family protein 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3012 7 S Function unknown (S) Uncharacterized conserved protein YchJ, contains N- and C-terminal SEC-C domains

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K09858 7 SEC-C motif domain protein - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF02810 7 SEC-C motif
PF17775 7 YchJ, middle NTF2-like domain

Annotations of the 532 SwissProt hits

Annotation Number of occurrences
Protein translocase subunit SecA 395
Protein translocase subunit SecA 1 33
UPF0225 protein Asuc_0343 1
UPF0225 protein BB3385 1
UPF0225 protein BP2036 1
UPF0225 protein BPP1723 1
UPF0225 protein Bpro_4182 1
UPF0225 protein CE1570 1
UPF0225 protein CGSHiEE_01665 1
UPF0225 protein CGSHiGG_04185 1
UPF0225 protein CV_3559 1
UPF0225 protein Cgl1438/cg1626 1
UPF0225 protein DR_0483 1
UPF0225 protein ECA2332 1
UPF0225 protein ETA_15740 1
UPF0225 protein Ent638_2310 1
UPF0225 protein GSU1048 1
UPF0225 protein HI_0277 1
UPF0225 protein KPK_2103 1
UPF0225 protein Mpe_A2093 1
UPF0225 protein NTHI0386 1
UPF0225 protein PA1039 1
UPF0225 protein PA14_50900 1
UPF0225 protein PC1_1977 1
UPF0225 protein PFLU_1319 1
UPF0225 protein PLES_42841 1
UPF0225 protein PM1617 1
UPF0225 protein PMI1492 1
UPF0225 protein PP_1119 1
UPF0225 protein PSEEN1229 1
UPF0225 protein PSPPH_1399 1
UPF0225 protein PSPTO_4127 1
UPF0225 protein Pfl01_1218 1
UPF0225 protein Pnap_0466 1
UPF0225 protein PputGB1_4297 1
UPF0225 protein PputW619_1140 1
UPF0225 protein Pput_1155 1
UPF0225 protein Psyr_3863 1
UPF0225 protein RSc0270 1
UPF0225 protein Reut_A0143 1
UPF0225 protein Rmet_0111 1
UPF0225 protein SAV_6631 1
UPF0225 protein SCO1677 1
UPF0225 protein SG1365 1
UPF0225 protein SO_2497 1
UPF0225 protein Shewana3_2159 1
UPF0225 protein Shewmr4_2054 1
UPF0225 protein Shewmr7_1921 1
UPF0225 protein Spro_2712 1
UPF0225 protein VC0395_A1443/VC395_1967 1
UPF0225 protein VCM66_1775 1
UPF0225 protein VC_1852 1
UPF0225 protein VP1145 1
UPF0225 protein VV1358 1
UPF0225 protein VV1_2912 1
UPF0225 protein XAC4297 1
UPF0225 protein XCC4159 1
UPF0225 protein XC_4246 1
UPF0225 protein XOO0258 1
UPF0225 protein XOO0286 1
UPF0225 protein YE2246 1
UPF0225 protein YPA_1530 1
UPF0225 protein YPDSF_0962 1
UPF0225 protein YPK_2079 1
UPF0225 protein YPN_1639 1
UPF0225 protein YPO2172/y2149/YP_1971 1
UPF0225 protein YPTB2098 1
UPF0225 protein YPTS_2164 1
UPF0225 protein YchJ 32
UPF0225 protein YpAngola_A2333 1
UPF0225 protein YpsIP31758_1970 1
UPF0225 protein plu2503 1
Uncharacterized protein YccF 1
Uncharacterized protein YecA 2

Protein length

Min length 158
Max length 163
Mean length (sd) 158.7 (1.9)
Median length 158.0

Protein length distribution