Orthogroup:group_1037


Homologs in group_1037

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_05845 FBDBKF_05845 Morganella morganii S1 ydiK AI-2E family transporter YdiK
EHELCC_11745 EHELCC_11745 Morganella morganii S2 ydiK AI-2E family transporter YdiK
NLDBIP_12085 NLDBIP_12085 Morganella morganii S4 ydiK AI-2E family transporter YdiK
LHKJJB_11945 LHKJJB_11945 Morganella morganii S3 ydiK AI-2E family transporter YdiK
HKOGLL_10560 HKOGLL_10560 Morganella morganii S5 ydiK AI-2E family transporter YdiK
F4V73_RS03480 F4V73_RS03480 Morganella psychrotolerans ydiK AI-2E family transporter YdiK
PMI_RS06870 PMI_RS06870 Proteus mirabilis HI4320 ydiK AI-2E family transporter YdiK

Distribution of group_1037 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1037 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1037

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1037.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 ydiK 7

Product

# Product Occurence
1 AI-2E family transporter YdiK 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0628 7 R General function prediction only (R) Predicted PurR-regulated permease PerM

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01594 7 AI-2E family transporter

Annotations of the 11 SwissProt hits

Annotation Number of occurrences
Putative transport protein BU123 1
Putative transport protein BUsg_115 1
Putative transport protein MJ1177 1
Putative transport protein MT1133 1
Putative transport protein MTH_1211 1
Putative transport protein PH1000 1
Putative transport protein Rv1101c 1
Putative transport protein YdiK 2
Putative transport protein aq_740 1
Putative transport protein bbp_117 1

Protein length

Min length 370
Max length 371
Mean length (sd) 370.9 (0.4)
Median length 371.0

Protein length distribution