Orthogroup:group_1003


Homologs in group_1003

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_05605 FBDBKF_05605 Morganella morganii S1 pspB envelope stress response membrane protein PspB
EHELCC_11985 EHELCC_11985 Morganella morganii S2 pspB envelope stress response membrane protein PspB
NLDBIP_12325 NLDBIP_12325 Morganella morganii S4 pspB envelope stress response membrane protein PspB
LHKJJB_12185 LHKJJB_12185 Morganella morganii S3 pspB envelope stress response membrane protein PspB
HKOGLL_10800 HKOGLL_10800 Morganella morganii S5 pspB envelope stress response membrane protein PspB
F4V73_RS03700 F4V73_RS03700 Morganella psychrotolerans pspB envelope stress response membrane protein PspB
PMI_RS06640 PMI_RS06640 Proteus mirabilis HI4320 pspB envelope stress response membrane protein PspB

Distribution of group_1003 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1003 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1003

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1003.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 pspB 7

Product

# Product Occurence
1 envelope stress response membrane protein PspB 7

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03970 7 phage shock protein B - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF06667 7 Phage shock protein B

Annotations of the 3 SwissProt hits

Annotation Number of occurrences
Phage shock protein B 3

Protein length

Min length 73
Max length 76
Mean length (sd) 73.4 (1.1)
Median length 73.0

Protein length distribution