Homologs in group_1143

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_06545 FBDBKF_06545 73.9 Morganella morganii S1 creA protein CreA
EHELCC_09590 EHELCC_09590 73.9 Morganella morganii S2 creA protein CreA
NLDBIP_09970 NLDBIP_09970 73.9 Morganella morganii S4 creA protein CreA
LHKJJB_07785 LHKJJB_07785 73.9 Morganella morganii S3 creA protein CreA
HKOGLL_07335 HKOGLL_07335 73.9 Morganella morganii S5 creA protein CreA
F4V73_RS15390 F4V73_RS15390 73.9 Morganella psychrotolerans creA protein CreA

Distribution of the homologs in the orthogroup group_1143

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_1143

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0AE94 5.7e-78 231 75 0 140 3 creA Protein CreA Shigella flexneri
P0AE91 5.7e-78 231 75 0 140 3 creA Protein CreA Escherichia coli (strain K12)
P0AE92 5.7e-78 231 75 0 140 3 creA Protein CreA Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AE93 5.7e-78 231 75 0 140 3 creA Protein CreA Escherichia coli O157:H7

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS18500
Feature type CDS
Gene creA
Product protein CreA
Location 4061748 - 4062224 (strand: 1)
Length 477 (nucleotides) / 158 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1143
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF05981 CreA protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3045 Signal transduction mechanisms (T) T Periplasmic catabolite regulation protein CreA (function unknown)

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K05805 CreA protein - -

Protein Sequence

MFNFKKILALSILLPMSIMVKAEEIGYVDTVFKFFGANHKIVIEAFDDPEVKNVTCYLSRAKTGGISGSLGLAEDTADAAISCQQVGPIELSEKVLKGKNRGDVVFQKRTSLVFKKLQVVRFYDKNRHALIYLTYSDKVIDGSPKNAISAVPIMPWKE

Flanking regions ( +/- flanking 50bp)

TTTATCCTAGACAAAATCATTCTTTCTTCTTTTTATGGAATAAATTTAATATGTTTAATTTCAAAAAGATACTCGCACTTTCTATCTTGCTTCCTATGTCAATAATGGTGAAAGCTGAAGAAATTGGTTATGTCGATACGGTTTTTAAGTTTTTTGGTGCCAATCATAAAATTGTCATTGAAGCTTTTGATGATCCTGAAGTCAAAAATGTCACTTGCTATTTAAGCCGTGCTAAAACAGGGGGCATTTCCGGTAGTTTAGGGCTTGCTGAAGATACCGCCGATGCGGCTATTTCTTGCCAACAAGTAGGGCCAATCGAATTAAGCGAAAAAGTCTTAAAAGGTAAAAATCGTGGTGATGTTGTTTTTCAAAAAAGAACGTCACTAGTCTTTAAAAAGCTACAAGTGGTGCGTTTTTACGATAAAAACCGCCATGCACTGATATATCTTACTTACTCTGATAAGGTTATCGATGGCTCACCGAAAAATGCCATTAGTGCAGTACCCATCATGCCATGGAAAGAGTAATTTTTTTAATTAATTAACAAAATTAATAAGATTAAGTGTAAGAAATTTTT