Homologs in group_2308

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_17725 FBDBKF_17725 43.6 Morganella morganii S1 fecR Periplasmic ferric-dicitrate binding protein FecR, regulates iron transport
EHELCC_09750 EHELCC_09750 43.6 Morganella morganii S2 fecR Periplasmic ferric-dicitrate binding protein FecR, regulates iron transport
NLDBIP_10130 NLDBIP_10130 43.6 Morganella morganii S4 fecR Periplasmic ferric-dicitrate binding protein FecR, regulates iron transport
LHKJJB_07625 LHKJJB_07625 43.6 Morganella morganii S3 fecR Periplasmic ferric-dicitrate binding protein FecR, regulates iron transport
HKOGLL_07175 HKOGLL_07175 43.6 Morganella morganii S5 fecR Periplasmic ferric-dicitrate binding protein FecR, regulates iron transport
F4V73_RS15235 F4V73_RS15235 45.1 Morganella psychrotolerans - FecR domain-containing protein

Distribution of the homologs in the orthogroup group_2308

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_2308

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P23485 8.14e-10 62 26 10 296 1 fecR Ferric citrate uptake sigma factor regulator FecR Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS18445
Feature type CDS
Gene -
Product FecR domain-containing protein
Location 4050572 - 4051585 (strand: -1)
Length 1014 (nucleotides) / 337 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_2308
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF04773 FecR protein
PF16220 Domain of unknown function (DUF4880)

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3712 Inorganic ion transport and metabolism (P)
Signal transduction mechanisms (T)		 PT Periplasmic ferric-dicitrate binding protein FecR, regulates iron transport

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07165 transmembrane sensor Two-component system -

Protein Sequence

MTSKSGNQPHTDEAPATLLADTHDQLSQQSIDEQAALWFTRQHSQQMSSQQRQAFKQWVADKDNQQAYQAIAEIWHSCEALPRPTIVPIEKRKSSLWRPFIHTTAALCLVAVLYLPYSHLPALLMDNMTLATSNFPKEMTLADGSKVFLNRNTQVRVSYVQTQRRLWLDKGEAYFKVKPNPYRPFYVHADERLIKVVGTEFEVSRYQNNQISVAVHEGIVEVKATEKSPATYLYAGSQAISQSTDNQFVISSVNADSVGSWRFGQLHFFEQPLGDVITKLKPYLDINVHISSADVAKIKVSGVANINDAKSFITALPLLLPVNVIFTDKNNVLIINK

Flanking regions ( +/- flanking 50bp)

ACTATTACATTGTAAAAGATATGTCGATGCAGGACAGGAGAAATGCACCAATGACGAGTAAGTCGGGAAATCAACCTCACACAGATGAGGCGCCTGCAACGCTTTTGGCAGATACCCATGATCAATTAAGCCAGCAATCTATTGATGAACAAGCTGCGCTTTGGTTCACCCGTCAACATAGTCAGCAAATGAGTTCACAGCAACGACAAGCCTTTAAACAGTGGGTAGCAGATAAAGATAATCAACAAGCTTATCAAGCTATCGCGGAAATTTGGCATAGTTGTGAAGCCTTACCACGCCCTACTATTGTGCCTATAGAAAAAAGGAAATCTTCACTCTGGCGCCCCTTTATTCACACTACAGCCGCACTCTGTTTAGTTGCTGTGTTATATCTTCCTTATAGTCATTTACCTGCCCTGTTAATGGATAATATGACCTTAGCCACCAGCAATTTTCCTAAAGAGATGACCCTCGCTGATGGCTCTAAAGTTTTTTTAAATAGAAATACACAGGTACGCGTCTCGTATGTCCAAACCCAAAGACGCCTTTGGTTAGATAAAGGTGAGGCTTATTTTAAAGTAAAACCCAATCCTTATCGGCCATTTTATGTCCATGCTGATGAGCGATTAATTAAAGTTGTCGGTACTGAATTTGAAGTGAGTCGTTATCAAAATAATCAAATTAGTGTCGCCGTACATGAGGGCATTGTTGAAGTTAAAGCCACAGAAAAATCCCCTGCGACTTACCTATATGCTGGCTCTCAAGCAATTAGCCAATCAACTGATAATCAATTTGTCATTTCCTCAGTCAATGCTGATTCTGTAGGAAGCTGGCGTTTTGGGCAACTCCATTTCTTTGAACAACCACTTGGTGACGTGATCACTAAATTAAAACCTTATCTGGATATCAACGTTCATATCTCATCAGCCGATGTAGCCAAAATAAAGGTATCAGGTGTGGCAAATATTAATGACGCGAAAAGCTTTATTACTGCACTTCCGCTACTTTTACCGGTTAATGTTATTTTTACTGATAAAAATAATGTGTTAATTATCAATAAGTAAAAATAAACATGAAAAATATTCTTTTTTACAGGTGAGGATAATTCTCATTT