Orthogroup:group_2340



Homologs in group_2340

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7 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_18640 FBDBKF_18640 Morganella morganii S1 - Terminase
FBDBKF_19415 FBDBKF_19415 Morganella morganii S1 ymfN Phage terminase-like protein, large subunit, contains N-terminal HTH domain
EHELCC_15215 EHELCC_15215 Morganella morganii S2 - Terminase
NLDBIP_15745 NLDBIP_15745 Morganella morganii S4 - Terminase
LHKJJB_16095 LHKJJB_16095 Morganella morganii S3 - Terminase
HKOGLL_15215 HKOGLL_15215 Morganella morganii S5 - Terminase
PMI_RS04530 PMI_RS04530 Proteus mirabilis HI4320 - terminase large subunit

Distribution of group_2340 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2340 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2340

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2340.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 - 6
2 ymfN 1

Product

# Product Occurence
1 Terminase 5
2 Phage terminase-like protein, large subunit, contains N-terminal HTH domain 1
3 terminase large subunit 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG4626 7 X Mobilome: prophages, transposons (X) Phage terminase-like protein, large subunit, contains N-terminal HTH domain

Pfam domain Annotation(s)

Domain ID Occurences Description
PF03354 7 Terminase large subunit, ATPase domain
PF20441 7 Terminase large subunit, endonuclease domain

Annotations of the 4 SwissProt hits

Annotation Number of occurrences
Protein YmfN 1
Putative terminase large subunit 1
Terminase large subunit 2

Protein length

Min length 576
Max length 577
Mean length (sd) 576.1 (0.4)
Median length 576.0

Protein length distribution