Homologs in group_707

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_03065 FBDBKF_03065 51.5 Morganella morganii S1 lpoA Outer membrane lipoprotein LpoA, binds and activates PBP1a
EHELCC_07470 EHELCC_07470 51.5 Morganella morganii S2 lpoA Outer membrane lipoprotein LpoA, binds and activates PBP1a
NLDBIP_07795 NLDBIP_07795 51.5 Morganella morganii S4 lpoA Outer membrane lipoprotein LpoA, binds and activates PBP1a
LHKJJB_07330 LHKJJB_07330 51.5 Morganella morganii S3 lpoA Outer membrane lipoprotein LpoA, binds and activates PBP1a
HKOGLL_03600 HKOGLL_03600 51.5 Morganella morganii S5 lpoA Outer membrane lipoprotein LpoA, binds and activates PBP1a
F4V73_RS11855 F4V73_RS11855 50.4 Morganella psychrotolerans - penicillin-binding protein activator

Distribution of the homologs in the orthogroup group_707

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_707

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
A7FDZ0 6.92e-164 485 46 8 563 3 lpoA Penicillin-binding protein activator LpoA Yersinia pseudotuberculosis serotype O:1b (strain IP 31758)
A9R1Q6 8.2e-162 480 45 6 563 3 lpoA Penicillin-binding protein activator LpoA Yersinia pestis bv. Antiqua (strain Angola)
A8GJZ0 1.01e-158 473 46 11 554 3 lpoA Penicillin-binding protein activator LpoA Serratia proteamaculans (strain 568)
B2VDC8 5.48e-155 463 44 6 559 3 lpoA Penicillin-binding protein activator LpoA Erwinia tasmaniensis (strain DSM 17950 / CFBP 7177 / CIP 109463 / NCPPB 4357 / Et1/99)
D0KEP3 9.64e-152 454 43 8 563 3 lpoA Penicillin-binding protein activator LpoA Pectobacterium parmentieri (strain WPP163)
Q2NWH5 2.88e-151 453 43 10 568 3 lpoA Penicillin-binding protein activator LpoA Sodalis glossinidius (strain morsitans)
D4GNT6 1.56e-150 452 43 11 595 3 lpoA Penicillin-binding protein activator LpoA Pantoea ananatis (strain LMG 20103)
C5B768 4.73e-149 448 43 7 566 3 lpoA Penicillin-binding protein activator LpoA Edwardsiella ictaluri (strain 93-146)
D0ZBY2 1.46e-148 447 43 8 584 3 lpoA Penicillin-binding protein activator LpoA Edwardsiella tarda (strain EIB202)
Q8FDA1 6.82e-145 437 41 9 584 3 lpoA Penicillin-binding protein activator LpoA Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q3YX94 1.39e-144 436 41 8 584 3 lpoA Penicillin-binding protein activator LpoA Shigella sonnei (strain Ss046)
D2A869 1.56e-144 436 41 8 584 3 lpoA Penicillin-binding protein activator LpoA Shigella flexneri serotype X (strain 2002017)
Q0T0D4 2.86e-144 436 41 8 584 3 lpoA Penicillin-binding protein activator LpoA Shigella flexneri serotype 5b (strain 8401)
P45464 4.45e-144 435 41 8 584 1 lpoA Penicillin-binding protein activator LpoA Escherichia coli (strain K12)
A6TEG6 5.33e-138 420 41 7 568 3 lpoA Penicillin-binding protein activator LpoA Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
C6CMD7 6.16e-138 419 41 6 566 3 lpoA Penicillin-binding protein activator LpoA Dickeya chrysanthemi (strain Ech1591)
A4WEW2 2.12e-90 297 45 4 318 3 lpoA Penicillin-binding protein activator LpoA Enterobacter sp. (strain 638)
B8F4Z1 3.94e-50 185 34 6 310 3 lpoA Penicillin-binding protein activator LpoA Glaesserella parasuis serovar 5 (strain SH0165)
B8F4Z1 6.52e-12 72 31 2 169 3 lpoA Penicillin-binding protein activator LpoA Glaesserella parasuis serovar 5 (strain SH0165)
Q9CN03 1.93e-47 178 35 8 310 3 lpoA Penicillin-binding protein activator LpoA Pasteurella multocida (strain Pm70)
Q9CN03 3.53e-16 85 34 3 163 3 lpoA Penicillin-binding protein activator LpoA Pasteurella multocida (strain Pm70)
Q6LME4 2.5e-45 172 31 7 316 3 lpoA Penicillin-binding protein activator LpoA Photobacterium profundum (strain SS9)
Q6LME4 1.87e-08 60 35 2 114 3 lpoA Penicillin-binding protein activator LpoA Photobacterium profundum (strain SS9)
Q0I2P5 1.3e-43 167 31 4 323 3 lpoA Penicillin-binding protein activator LpoA Histophilus somni (strain 129Pt)
Q0I2P5 2.37e-10 67 32 2 140 3 lpoA Penicillin-binding protein activator LpoA Histophilus somni (strain 129Pt)
B0UTT2 1.42e-43 167 31 4 323 3 lpoA Penicillin-binding protein activator LpoA Histophilus somni (strain 2336)
B0UTT2 2.47e-10 67 32 2 140 3 lpoA Penicillin-binding protein activator LpoA Histophilus somni (strain 2336)
Q7VMZ8 4.17e-43 166 32 6 310 3 lpoA Penicillin-binding protein activator LpoA Haemophilus ducreyi (strain 35000HP / ATCC 700724)
Q7VMZ8 1.57e-11 70 31 0 143 3 lpoA Penicillin-binding protein activator LpoA Haemophilus ducreyi (strain 35000HP / ATCC 700724)
C3LS71 1.84e-40 159 25 15 586 3 lpoA Penicillin-binding protein activator LpoA Vibrio cholerae serotype O1 (strain M66-2)
C3NVZ3 1.84e-40 159 25 15 586 3 lpoA Penicillin-binding protein activator LpoA Vibrio cholerae serotype O1 (strain MJ-1236)
Q9KUE0 1.84e-40 159 25 15 586 3 lpoA Penicillin-binding protein activator LpoA Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
A5F987 1.84e-40 159 25 15 586 3 lpoA Penicillin-binding protein activator LpoA Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)
D0M814 1.92e-37 150 31 8 305 3 lpoA Penicillin-binding protein activator LpoA Vibrio antiquarius (strain Ex25)
Q5E2P0 1.99e-37 150 31 7 299 3 lpoA Penicillin-binding protein activator LpoA Aliivibrio fischeri (strain ATCC 700601 / ES114)
Q5E2P0 0.000465 47 25 1 134 3 lpoA Penicillin-binding protein activator LpoA Aliivibrio fischeri (strain ATCC 700601 / ES114)
Q7MNW1 7.35e-37 148 33 10 305 3 lpoA Penicillin-binding protein activator LpoA Vibrio vulnificus (strain YJ016)
P45299 8.36e-36 145 30 7 318 1 lpoA Penicillin-binding protein activator LpoA Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P45299 4.22e-13 75 33 2 142 1 lpoA Penicillin-binding protein activator LpoA Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q65T15 1.11e-29 127 32 9 314 3 lpoA Penicillin-binding protein activator LpoA Mannheimia succiniciproducens (strain KCTC 0769BP / MBEL55E)
Q65T15 7.07e-14 78 34 2 139 3 lpoA Penicillin-binding protein activator LpoA Mannheimia succiniciproducens (strain KCTC 0769BP / MBEL55E)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS18370
Feature type CDS
Gene -
Product penicillin-binding protein activator
Location 4030692 - 4032464 (strand: -1)
Length 1773 (nucleotides) / 590 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_707
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF04348 LppC putative lipoprotein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3107 Cell wall/membrane/envelope biogenesis (M) M Outer membrane lipoprotein LpoA, binds and activates PBP1a

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07121 uncharacterized protein - -

Protein Sequence

MLSSIFVRFKTGLSYTAILSALIMSGCTLTGQQQQPLTPAEKAQVEMKQFQKVIDDANGQASLDVIRAYIGLEPLITDPVLHQQNIDDTWLTLTKLTPEQRRSVVIKADENTLQGWLDLLNTYEYNQDDADKLSQAIREWQTRYPRNPGALTLPTLLLRQSQSAVSNSGKIALLLPLTGQAKVFGNAIMQGFTDAKEGLPQPQANAAPEAPQQDSLASILAELGISSPNADTATTENDNSTDDNTAEGAENSDATSAKETEAFAGNSRVQLDPIVQNNRQVIMYDTNSQPIDLLLKQVQQEGADLIVGPLLKPEVIKTIELKSGLPVLALNEVDNIPLATTVCFFSLSPEDETRNAAQHLRQQQKSNPLIIVPDNKFGQRMAQTFADEWQRSGGGTVLQQTFGSLDSLKSSINRGVGIRMTGTPVLPTDNAPLPLDTASMPTTNGAIDSVYIIATSDELTLIKPMIDMAISTKKRPPIYVSSRSNQGGMGPDFRMEMDGIQFSDIPLMTGANLPLMQKASSKFANDYSLMRLYAMGIDAWSLANNYNELTKGTLQFNGVSGSLRVEDNCTIYRQLPWMQFKQGKIEPVGQ

Flanking regions ( +/- flanking 50bp)

AATGACCGATTTAAAATTGAGCATAATTATAAAACATCACTGGGTACAGTATGCTTTCCTCAATTTTTGTGCGTTTTAAAACAGGTTTATCCTATACTGCAATACTTTCTGCCTTGATTATGTCAGGTTGTACCCTGACGGGGCAACAACAACAGCCACTGACACCTGCTGAAAAAGCGCAAGTGGAAATGAAACAATTTCAGAAAGTCATTGATGATGCGAACGGACAAGCCTCTTTAGATGTGATCCGTGCCTATATTGGCCTAGAACCCCTTATCACTGATCCTGTATTACATCAGCAAAATATTGATGATACTTGGTTAACACTCACGAAGCTTACACCTGAGCAACGTCGTAGTGTGGTAATCAAAGCTGATGAAAATACATTACAAGGCTGGTTAGATTTACTCAACACTTATGAATATAACCAAGATGATGCGGATAAATTATCCCAAGCAATACGCGAATGGCAAACACGCTATCCACGCAATCCAGGAGCGCTAACATTACCGACGCTGTTATTGCGCCAATCACAATCTGCCGTCAGTAATAGCGGAAAAATCGCATTATTATTACCGTTAACAGGACAAGCTAAAGTATTTGGTAATGCTATTATGCAAGGCTTTACCGATGCTAAAGAAGGTTTACCTCAACCTCAAGCTAACGCAGCGCCAGAAGCCCCCCAACAAGATAGTTTAGCTTCCATTTTAGCAGAATTAGGTATTTCATCTCCGAATGCAGACACAGCAACAACGGAAAACGATAATTCAACGGATGATAATACAGCGGAAGGCGCTGAAAATAGTGATGCTACTTCAGCAAAAGAAACCGAAGCCTTTGCGGGTAATAGCCGCGTGCAATTAGATCCTATTGTCCAAAATAATCGCCAAGTGATTATGTATGATACCAATAGCCAACCCATTGATCTGTTACTGAAACAAGTGCAACAAGAGGGTGCTGATTTAATTGTGGGGCCACTATTAAAACCCGAAGTGATCAAAACTATTGAATTAAAAAGTGGTTTACCTGTTTTAGCACTAAATGAAGTTGATAATATTCCTCTTGCTACTACAGTGTGTTTCTTTTCACTTTCCCCAGAAGATGAAACTCGTAATGCGGCTCAACACTTACGCCAGCAACAAAAATCTAATCCACTTATTATCGTTCCTGACAATAAATTCGGTCAAAGAATGGCACAAACTTTTGCGGATGAGTGGCAGCGTAGCGGGGGGGGAACCGTCTTACAACAAACTTTCGGCTCTCTTGATAGTCTAAAAAGTTCAATTAATCGTGGCGTGGGTATTCGAATGACAGGAACCCCTGTATTGCCAACAGACAATGCACCACTGCCATTAGATACCGCTTCAATGCCAACAACAAACGGTGCTATCGATTCTGTGTATATCATTGCCACTAGCGATGAGTTAACATTGATTAAACCAATGATTGATATGGCAATCAGTACCAAAAAACGCCCACCGATTTATGTCAGTTCACGCAGTAATCAAGGGGGAATGGGGCCAGATTTTCGTATGGAAATGGACGGTATCCAATTTAGTGATATTCCTCTTATGACGGGAGCAAATTTACCGTTAATGCAAAAAGCATCCAGTAAATTTGCGAACGATTACTCATTAATGCGCCTTTACGCTATGGGTATTGATGCATGGTCATTAGCAAACAATTACAATGAACTCACCAAAGGAACCTTACAGTTCAATGGTGTTTCTGGCTCTTTACGTGTGGAAGATAATTGCACTATTTATCGACAACTCCCATGGATGCAATTTAAACAAGGTAAAATTGAACCTGTGGGACAATAAGTAAGCAATTTACCCCATAAACCGCCTCTTTGAAGTCTCCGGATAAGGAG