Homologs in group_707

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_03065 FBDBKF_03065 81.2 Morganella morganii S1 lpoA Outer membrane lipoprotein LpoA, binds and activates PBP1a
EHELCC_07470 EHELCC_07470 81.2 Morganella morganii S2 lpoA Outer membrane lipoprotein LpoA, binds and activates PBP1a
NLDBIP_07795 NLDBIP_07795 81.2 Morganella morganii S4 lpoA Outer membrane lipoprotein LpoA, binds and activates PBP1a
LHKJJB_07330 LHKJJB_07330 81.2 Morganella morganii S3 lpoA Outer membrane lipoprotein LpoA, binds and activates PBP1a
HKOGLL_03600 HKOGLL_03600 81.2 Morganella morganii S5 lpoA Outer membrane lipoprotein LpoA, binds and activates PBP1a
PMI_RS18370 PMI_RS18370 50.4 Proteus mirabilis HI4320 - penicillin-binding protein activator

Distribution of the homologs in the orthogroup group_707

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_707

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
A8GJZ0 5e-155 463 44 14 614 3 lpoA Penicillin-binding protein activator LpoA Serratia proteamaculans (strain 568)
A7FDZ0 4.33e-146 440 44 12 574 3 lpoA Penicillin-binding protein activator LpoA Yersinia pseudotuberculosis serotype O:1b (strain IP 31758)
D0KEP3 4.5e-146 440 44 11 569 3 lpoA Penicillin-binding protein activator LpoA Pectobacterium parmentieri (strain WPP163)
A9R1Q6 6.21e-143 432 43 11 574 3 lpoA Penicillin-binding protein activator LpoA Yersinia pestis bv. Antiqua (strain Angola)
C5B768 4.85e-142 430 42 8 568 3 lpoA Penicillin-binding protein activator LpoA Edwardsiella ictaluri (strain 93-146)
Q2NWH5 3.53e-140 425 43 10 580 3 lpoA Penicillin-binding protein activator LpoA Sodalis glossinidius (strain morsitans)
D0ZBY2 9.37e-138 420 43 9 568 3 lpoA Penicillin-binding protein activator LpoA Edwardsiella tarda (strain EIB202)
D4GNT6 2e-136 416 41 10 580 3 lpoA Penicillin-binding protein activator LpoA Pantoea ananatis (strain LMG 20103)
B2VDC8 2.65e-136 415 42 11 570 3 lpoA Penicillin-binding protein activator LpoA Erwinia tasmaniensis (strain DSM 17950 / CFBP 7177 / CIP 109463 / NCPPB 4357 / Et1/99)
A6TEG6 7.26e-136 415 41 11 578 3 lpoA Penicillin-binding protein activator LpoA Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
Q8FDA1 7.6e-133 406 42 10 566 3 lpoA Penicillin-binding protein activator LpoA Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
D2A869 1.79e-132 405 42 10 566 3 lpoA Penicillin-binding protein activator LpoA Shigella flexneri serotype X (strain 2002017)
Q3YX94 1.87e-132 405 41 10 568 3 lpoA Penicillin-binding protein activator LpoA Shigella sonnei (strain Ss046)
Q0T0D4 6.73e-132 404 41 9 566 3 lpoA Penicillin-binding protein activator LpoA Shigella flexneri serotype 5b (strain 8401)
P45464 1.95e-131 403 41 10 568 1 lpoA Penicillin-binding protein activator LpoA Escherichia coli (strain K12)
C6CMD7 1.35e-130 401 40 8 579 3 lpoA Penicillin-binding protein activator LpoA Dickeya chrysanthemi (strain Ech1591)
A4WEW2 1.36e-85 285 45 4 319 3 lpoA Penicillin-binding protein activator LpoA Enterobacter sp. (strain 638)
Q6LME4 3.13e-44 170 34 11 321 3 lpoA Penicillin-binding protein activator LpoA Photobacterium profundum (strain SS9)
Q6LME4 6.02e-09 62 34 2 119 3 lpoA Penicillin-binding protein activator LpoA Photobacterium profundum (strain SS9)
Q7VMZ8 7.75e-40 157 32 8 308 3 lpoA Penicillin-binding protein activator LpoA Haemophilus ducreyi (strain 35000HP / ATCC 700724)
Q7VMZ8 7.64e-10 65 27 3 172 3 lpoA Penicillin-binding protein activator LpoA Haemophilus ducreyi (strain 35000HP / ATCC 700724)
Q0I2P5 2.78e-38 152 32 6 308 3 lpoA Penicillin-binding protein activator LpoA Histophilus somni (strain 129Pt)
Q0I2P5 2.23e-11 70 30 4 153 3 lpoA Penicillin-binding protein activator LpoA Histophilus somni (strain 129Pt)
B0UTT2 3.27e-38 152 32 6 308 3 lpoA Penicillin-binding protein activator LpoA Histophilus somni (strain 2336)
B0UTT2 2.31e-11 70 30 4 153 3 lpoA Penicillin-binding protein activator LpoA Histophilus somni (strain 2336)
B8F4Z1 1.19e-36 147 31 6 305 3 lpoA Penicillin-binding protein activator LpoA Glaesserella parasuis serovar 5 (strain SH0165)
B8F4Z1 6.01e-13 75 33 5 164 3 lpoA Penicillin-binding protein activator LpoA Glaesserella parasuis serovar 5 (strain SH0165)
Q9CN03 2.8e-36 146 31 7 312 3 lpoA Penicillin-binding protein activator LpoA Pasteurella multocida (strain Pm70)
Q9CN03 4.05e-12 72 33 3 143 3 lpoA Penicillin-binding protein activator LpoA Pasteurella multocida (strain Pm70)
Q5E2P0 3.34e-35 144 31 11 314 3 lpoA Penicillin-binding protein activator LpoA Aliivibrio fischeri (strain ATCC 700601 / ES114)
Q5E2P0 1.98e-06 54 25 3 166 3 lpoA Penicillin-binding protein activator LpoA Aliivibrio fischeri (strain ATCC 700601 / ES114)
C3LS71 4.83e-33 137 32 10 307 3 lpoA Penicillin-binding protein activator LpoA Vibrio cholerae serotype O1 (strain M66-2)
C3LS71 0.000109 48 26 3 164 3 lpoA Penicillin-binding protein activator LpoA Vibrio cholerae serotype O1 (strain M66-2)
C3NVZ3 4.83e-33 137 32 10 307 3 lpoA Penicillin-binding protein activator LpoA Vibrio cholerae serotype O1 (strain MJ-1236)
C3NVZ3 0.000109 48 26 3 164 3 lpoA Penicillin-binding protein activator LpoA Vibrio cholerae serotype O1 (strain MJ-1236)
Q9KUE0 4.83e-33 137 32 10 307 3 lpoA Penicillin-binding protein activator LpoA Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Q9KUE0 0.000109 48 26 3 164 3 lpoA Penicillin-binding protein activator LpoA Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
A5F987 4.83e-33 137 32 10 307 3 lpoA Penicillin-binding protein activator LpoA Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)
A5F987 0.000109 48 26 3 164 3 lpoA Penicillin-binding protein activator LpoA Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)
D0M814 1.35e-31 133 33 9 285 3 lpoA Penicillin-binding protein activator LpoA Vibrio antiquarius (strain Ex25)
P45299 7.57e-31 130 29 6 318 1 lpoA Penicillin-binding protein activator LpoA Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P45299 2.5e-11 70 32 4 139 1 lpoA Penicillin-binding protein activator LpoA Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q7MNW1 2.3e-30 129 31 9 307 3 lpoA Penicillin-binding protein activator LpoA Vibrio vulnificus (strain YJ016)
Q65T15 8.25e-27 118 30 7 315 3 lpoA Penicillin-binding protein activator LpoA Mannheimia succiniciproducens (strain KCTC 0769BP / MBEL55E)
Q65T15 1.61e-13 77 34 5 144 3 lpoA Penicillin-binding protein activator LpoA Mannheimia succiniciproducens (strain KCTC 0769BP / MBEL55E)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS11855
Feature type CDS
Gene -
Product penicillin-binding protein activator
Location 525354 - 527156 (strand: -1)
Length 1803 (nucleotides) / 600 (amino acids)

Contig

Accession term accessions NZ_VXKB01000002 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 573139 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_707
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF04348 LppC putative lipoprotein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3107 Cell wall/membrane/envelope biogenesis (M) M Outer membrane lipoprotein LpoA, binds and activates PBP1a

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07121 uncharacterized protein - -

Protein Sequence

MFSLTLSRYRKQLLCTALFSTLIISGCTLDNQTAGTGGKNQPETLVQQYQRVIDAAAGQPSMDAVRAFIAQEPLLTDPDAHQQNINETWLMLTRFSPDERNKVQINADETTLRGWMDLLIVWQGNQQDQKALLAAIGDWQIRYPENPAAKLLPQDLIQSMSSMYNQTGKNARVALFLPLSGQAKLMGDAIRQGFTDAQNGEANFTSGYQQTTTQAPAGQPALTTEPVAAQTTVSAADPDKDISTPDQANGAPSNNTDSDGATAASPVVAAAQEPAATSAPQAQPYSGEARSVTDVKIYDTDSQPLTTLLAQAQADGMDLIVGPLFKGDVTALASSNTPLNILALNELDTPIAKPNVCYFSLSPEDEARNAAQFIRQENKSAPLVLTQDNSFGRRIAQSFADEWQKNGGGVVRHQTFSGNPGSAIPLSGVPVIPASQQTAQTEGLVSQPEPAGGGVDSVYIIATSDQLTYIKPMLEFATSARGRPAFYASSRSNKAGTGKDFQFEMEGLRLTDIPLIAGGNPQLLSQVAGRFGNDYTRVRLYAMGMDAWRLANQYGDMQSHSLRMNGASGDLSITDNCTVYRRLPWLVFKQGNITPLASAN

Flanking regions ( +/- flanking 50bp)

AGATGATCACATTAGAATTGAGCTTTCAGAAAACTATAACCGGGTACAGTATGTTTTCCTTAACTTTATCGCGTTACCGCAAGCAATTACTTTGTACCGCATTATTTTCAACATTGATTATCTCAGGGTGTACGCTCGATAATCAAACTGCGGGTACAGGTGGCAAAAACCAACCGGAAACGCTGGTTCAGCAATATCAGCGGGTTATCGATGCTGCCGCCGGACAGCCGTCAATGGATGCCGTCCGTGCATTTATCGCTCAGGAGCCACTGCTCACCGACCCGGACGCACACCAGCAAAACATTAACGAAACCTGGCTGATGCTAACACGTTTTTCACCTGATGAGCGCAACAAGGTTCAGATTAACGCCGATGAAACCACGTTGCGTGGCTGGATGGATCTCCTGATCGTCTGGCAGGGCAACCAGCAGGATCAAAAAGCACTGCTTGCCGCCATCGGTGACTGGCAAATCCGTTATCCGGAAAACCCGGCGGCAAAACTTCTGCCGCAGGATTTAATCCAGTCCATGAGCAGCATGTACAATCAGACCGGGAAAAATGCCCGCGTCGCGCTCTTTCTGCCGCTGAGTGGTCAGGCAAAACTGATGGGTGATGCTATCCGTCAGGGCTTTACTGATGCACAAAACGGTGAGGCAAACTTTACCAGCGGCTATCAGCAGACAACAACACAGGCGCCTGCAGGTCAGCCTGCGCTGACAACGGAACCGGTGGCTGCACAAACCACTGTCAGTGCCGCAGATCCGGATAAAGATATCAGCACGCCTGATCAGGCTAATGGTGCGCCATCAAATAATACAGACAGTGACGGCGCAACGGCTGCCAGCCCGGTCGTGGCAGCGGCACAGGAACCTGCCGCAACATCCGCTCCGCAGGCTCAGCCATACAGCGGAGAAGCCCGCAGTGTCACAGACGTAAAAATCTACGACACCGACAGCCAGCCGCTCACAACATTACTGGCACAGGCACAGGCTGATGGCATGGATTTGATTGTCGGGCCATTGTTCAAAGGTGATGTTACGGCTCTCGCATCAAGCAATACACCTCTGAATATTCTTGCGCTCAATGAATTAGACACACCAATTGCCAAGCCGAATGTCTGCTATTTTTCACTCTCACCTGAGGATGAAGCCCGCAATGCCGCGCAGTTTATCCGTCAGGAAAATAAATCCGCACCGCTGGTACTGACGCAGGACAACAGCTTCGGTCGCCGTATTGCGCAAAGCTTTGCTGATGAATGGCAGAAAAACGGCGGCGGCGTTGTGCGCCACCAGACGTTCTCCGGAAATCCCGGCAGTGCAATCCCGCTTTCCGGTGTCCCGGTTATTCCTGCATCACAGCAGACCGCACAGACTGAAGGTCTGGTGAGCCAGCCGGAGCCAGCCGGTGGCGGAGTAGACTCTGTCTATATTATCGCCACATCGGATCAACTGACGTATATTAAACCGATGCTGGAATTTGCCACCAGTGCCCGCGGACGCCCGGCCTTTTATGCCAGCTCCCGCAGCAATAAAGCAGGCACCGGCAAAGATTTTCAGTTTGAGATGGAAGGTCTGAGACTGACTGACATTCCGTTAATTGCAGGTGGTAATCCGCAGTTACTGAGTCAGGTCGCAGGGCGGTTTGGTAATGACTATACCCGCGTCCGGCTGTATGCCATGGGAATGGATGCCTGGCGCCTGGCAAATCAGTACGGGGATATGCAGAGCCATTCCCTGCGCATGAACGGTGCGAGTGGTGACCTCTCCATTACGGATAATTGTACGGTTTACCGCCGGCTTCCGTGGCTTGTCTTTAAGCAGGGCAACATCACACCGCTGGCATCTGCCAACTAAGTTTTATCTGATTTTTGAGGGTGACCGGATGTCACCCCGTTCTGTTTGGC