Homologs in group_744

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_03310 FBDBKF_03310 52.9 Morganella morganii S1 - Ribonuclease
EHELCC_07225 EHELCC_07225 52.9 Morganella morganii S2 - Ribonuclease
NLDBIP_07550 NLDBIP_07550 52.9 Morganella morganii S4 - Ribonuclease
LHKJJB_07085 LHKJJB_07085 52.9 Morganella morganii S3 - Ribonuclease
HKOGLL_03845 HKOGLL_03845 52.9 Morganella morganii S5 - Ribonuclease
F4V73_RS11625 F4V73_RS11625 52.9 Morganella psychrotolerans - ribonuclease domain-containing protein

Distribution of the homologs in the orthogroup group_744

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_744

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P00649 8.7e-44 145 43 2 164 1 None Ribonuclease Bacillus intermedius
P48068 4.09e-43 143 44 3 165 3 None Ribonuclease Bacillus pumilus
P00648 1.83e-40 136 47 3 157 1 None Ribonuclease Bacillus amyloliquefaciens
P35078 9.37e-40 133 60 0 100 1 None Ribonuclease Niallia circulans
P37203 6.13e-38 129 59 0 100 1 None Ribonuclease Heyndrickxia coagulans

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS18105
Feature type CDS
Gene -
Product ribonuclease domain-containing protein
Location 3979500 - 3980006 (strand: 1)
Length 507 (nucleotides) / 168 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_744
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF00545 ribonuclease

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4290 Nucleotide transport and metabolism (F) F Guanyl-specific ribonuclease Sa

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K01167 ribonuclease T1 [EC:4.6.1.24] - -

Protein Sequence

MGKRLFPVLIVVAVLFFVLYKGLVPETQIPATAPPTSTTSTSSKSSISQPESQRPLAIDEKTQANKVADYLQQHARLPDFYISKKEARAKGWNAKAGNLCDVLPGRAIGGDRFMNREKQLPEEAGRQWFEADVNYQCGHRGSDRLLYSNDGLIYLTTDHYRTMQRVAP

Flanking regions ( +/- flanking 50bp)

CTCCATCGCTATGATGGAGTTTCTATTTAAGTGAGTAAATGGAGCTATTTATGGGCAAACGTCTATTCCCTGTTCTTATTGTTGTGGCTGTTTTATTTTTTGTTCTGTATAAAGGATTAGTACCTGAAACGCAGATACCAGCAACAGCGCCTCCTACATCAACAACATCTACATCGTCAAAGAGTTCAATCAGTCAGCCTGAGTCTCAACGTCCTTTAGCAATTGATGAAAAGACCCAAGCCAATAAAGTGGCTGATTATTTGCAACAACACGCTCGCTTACCTGATTTTTATATCAGCAAAAAAGAGGCTCGAGCTAAAGGTTGGAATGCGAAAGCGGGCAATTTATGTGACGTTTTACCAGGACGGGCGATTGGTGGTGATCGCTTTATGAACCGTGAAAAACAGTTACCTGAAGAAGCAGGGCGTCAATGGTTTGAAGCAGATGTCAATTATCAATGTGGACATCGTGGTAGCGATCGCCTGCTATATTCTAATGATGGATTAATTTATTTAACCACCGATCATTACCGTACCATGCAAAGAGTTGCACCTTAATGAAACAGATTATTTTTGATTTCAGCACATTGGCGGATCGAGATGCTTTT