COG4290


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG4290, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Guanyl-specific ribonuclease Sa
Function(s) descr. Nucleotide transport and metabolism (F)

Occurence in the database

COG4290 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_744 FBDBKF_03310 60865 61332 -1 Ribonuclease Morganella morganii S1
1 group_744 EHELCC_07225 185771 186238 1 Ribonuclease Morganella morganii S2
2 group_744 NLDBIP_07550 185644 186111 1 Ribonuclease Morganella morganii S4
3 group_744 LHKJJB_07085 149390 149857 1 Ribonuclease Morganella morganii S3
4 group_744 HKOGLL_03845 83530 83997 -1 Ribonuclease Morganella morganii S5
5 group_744 F4V73_RS11625 478621 479088 1 ribonuclease domain-containing protein Morganella psychrotolerans
6 group_744 PMI_RS18105 3979500 3980006 1 ribonuclease domain-containing protein Proteus mirabilis HI4320