Homologs in group_747

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_03325 FBDBKF_03325 44.4 Morganella morganii S1 yhdP AsmA2 domain-containing protein YhdP
EHELCC_07210 EHELCC_07210 44.4 Morganella morganii S2 yhdP AsmA2 domain-containing protein YhdP
NLDBIP_07535 NLDBIP_07535 44.4 Morganella morganii S4 yhdP AsmA2 domain-containing protein YhdP
LHKJJB_07070 LHKJJB_07070 44.4 Morganella morganii S3 yhdP AsmA2 domain-containing protein YhdP
HKOGLL_03860 HKOGLL_03860 44.4 Morganella morganii S5 yhdP AsmA2 domain-containing protein YhdP
F4V73_RS11610 F4V73_RS11610 45.1 Morganella psychrotolerans yhdP AsmA2 domain-containing protein YhdP

Distribution of the homologs in the orthogroup group_747

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_747

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P46474 0 935 38 11 1275 3 yhdP Uncharacterized protein YhdP Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS18090
Feature type CDS
Gene yhdP
Product AsmA2 domain-containing protein YhdP
Location 3973304 - 3977107 (strand: 1)
Length 3804 (nucleotides) / 1267 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_747
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF13116 Protein of unknown function
PF13502 AsmA-like C-terminal region

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3164 Function unknown (S) S Uncharacterized conserved protein YhdP, contains DUF3971 and AsmA2 domains

Protein Sequence

MKRLSKSLLLITLFCLIIFAVVLSGFRYFLPRLDNYRPEIETYLSKQFNSPVTMTQVKGEWQNFGPDIQITGLYIDNNSVEVSAEQITFSFDVWRSLLHFQLYFRELTFEQLAVNYKKPIFTGQNGDITFTEPDDISSIFLKQFDRFKLVDSRFVFLSPSGDTSTLHIPELMWLNQKNRHRAQGEVTLDTPINHYGGLKVRLDLYTKKQGALDKGQVFVTADEVDISPWLSQWVKSNSGLGEAKASLSNWIEISNGRITGSQLQIHQGEMDWRNEGRTHVLKVEDLILRMRRQENGWLADIPYTRKITMDGDEWPDGYLAVLYQPKEKQQDEAWRIRAKNIELERLSALLPLFSFLTPDVVRQWQYRQFSGMVDSFALDLAPDDFKRSAIDISWQNVAWKRWQEIPSVAHFNGHLKGTLQQGALNFALNNSEIDTAGLFKAPLNIEKGTGTVYWQHQGDSLSLWSQGIDIKATSAWVAGDFRYQKQGEHQQLSILSGVNVTDAGETWRYLPEKYVGKDLTQYLSDAIIAGNVKNGTFIFHGDPRDFPFEQHNGWFQVYAPVKQATFKYDSEWPALFDLNVNLNFKNNGLWMSSDNVQVGKATAKNLTAIIEDYNKEKIVIDADIEATGDDLKEYFLASQMATIGHTLEILKVAGKINGSLHLDIPFDGEQVVASGQVNLNNNDVTLAFMDTTLEGVTGQFRYHNDKLESDTLTANWFGQPLTFSFAGGDQRDAYQVGVDLKGQWDIGKIKGLPNDIQHKLSGFLPWHGAVSVNIPETADVNYQVDLTGQVNALQSQLAAPSTDDFKNASPIVISAKGNSEKLNVSADAQDQWSLNSEWALGEPLRLLQGNLVSSSLTLPQLNDQSRLTIALQGLQGDKWLPTLMAFSSLAPSENAIRFPTNIHISLPELNFAGQQWIAPQTEIMRADDGVKLSFSGSELRGDLFVPNTAQPWQVNITYLYFNGASPTEENKSLKMANVPDAKKAVQFSLKDIPAINFACQECWVNGLLLGNIEGAIQPRDGALLLTAGKLKNSSGELSVSGVWSEDSLGNSITKLAGKLTAPEVDEMAAYFGYIIPIVQSPLTADFSLQWHNTPWNFDLKTLNGEVNASLGKGRIEKVDVGQAGKLLRLVSFDALLRKLQFDFRDTFSDNFEYDSIKGDLTIKQGVLNAKSVAVDGVIADIAIKGQVDLLARKMDLQVVVTPEISATVGVATAFAINPIAGAAVFAASKVLGPLWSKISVIRYHVTGTVEQPKIDEVLRQLKEDQAL

Flanking regions ( +/- flanking 50bp)

ATGTAATGGATTCGCCTTGCTAATAAATATGATGGCAGAAAGGAGACTAAATGAAGCGGCTGTCTAAATCTTTATTATTGATAACCCTTTTTTGCCTGATTATTTTCGCCGTAGTATTAAGTGGATTTCGTTATTTTCTGCCTCGTTTAGATAATTATCGCCCTGAAATTGAAACCTATTTATCTAAACAGTTCAATAGCCCAGTCACCATGACACAGGTGAAAGGAGAATGGCAAAACTTTGGCCCTGATATCCAAATTACTGGGCTGTATATTGATAATAACAGTGTTGAAGTGAGTGCTGAACAGATCACTTTCTCTTTTGATGTTTGGCGTTCACTACTTCATTTTCAACTCTATTTTCGTGAATTAACCTTTGAACAATTAGCAGTAAATTACAAAAAGCCTATTTTTACTGGGCAAAATGGTGATATTACTTTCACTGAACCCGATGATATCTCTTCCATTTTCTTAAAACAGTTTGATCGATTTAAATTGGTTGATAGCCGTTTCGTGTTTTTATCACCTTCTGGTGACACTAGCACGCTCCATATTCCCGAATTAATGTGGCTCAATCAGAAAAACCGCCATCGTGCGCAAGGGGAAGTTACTTTAGATACCCCAATAAATCACTATGGTGGACTAAAAGTACGTCTTGATCTCTATACGAAAAAGCAGGGGGCACTGGATAAAGGACAGGTGTTTGTCACCGCTGATGAGGTTGATATTTCCCCTTGGTTAAGCCAATGGGTTAAAAGTAACAGTGGCCTTGGTGAAGCGAAAGCCAGCCTATCTAATTGGATAGAGATCAGCAATGGGCGGATCACGGGTAGCCAGTTACAAATCCATCAAGGTGAAATGGATTGGCGTAATGAAGGGCGCACACATGTATTAAAGGTAGAAGATTTAATTCTACGTATGAGACGCCAAGAAAATGGCTGGCTTGCTGATATCCCTTATACCCGAAAAATAACGATGGATGGTGATGAATGGCCAGATGGTTATTTAGCGGTACTTTATCAACCTAAAGAAAAACAACAGGATGAAGCTTGGCGTATCCGTGCTAAAAATATTGAATTAGAACGGTTATCTGCGTTATTGCCTTTGTTCTCCTTTTTAACGCCTGATGTCGTGCGCCAATGGCAGTATCGTCAATTTTCTGGCATGGTCGACTCATTTGCTCTTGATTTAGCCCCCGATGATTTTAAACGTAGTGCCATTGATATCAGTTGGCAAAATGTTGCTTGGAAACGCTGGCAAGAAATCCCTTCTGTGGCACATTTTAATGGTCATTTAAAGGGCACATTACAGCAAGGAGCGCTTAATTTTGCGCTTAATAACAGTGAAATTGATACTGCTGGGCTTTTTAAAGCGCCACTTAATATAGAAAAAGGCACTGGTACGGTTTACTGGCAGCATCAGGGAGATTCTCTGTCGTTATGGAGTCAAGGGATTGATATAAAAGCCACCTCCGCTTGGGTTGCCGGTGATTTTCGTTATCAAAAACAAGGAGAGCATCAACAACTGTCTATTCTTTCGGGAGTGAATGTGACCGATGCCGGTGAGACATGGCGCTATTTACCTGAAAAATATGTCGGTAAAGATTTAACACAATATCTCTCTGACGCGATTATTGCTGGAAACGTTAAAAACGGTACGTTTATTTTTCATGGTGATCCGCGGGATTTCCCTTTTGAACAACATAATGGTTGGTTTCAAGTCTATGCACCAGTAAAACAGGCGACCTTCAAATATGATAGTGAATGGCCGGCACTGTTTGATCTTAATGTTAATCTTAATTTTAAGAATAACGGCTTATGGATGTCCTCTGATAATGTTCAGGTTGGTAAAGCCACCGCTAAAAATTTGACGGCGATTATTGAGGACTATAACAAAGAAAAAATTGTTATTGATGCAGATATTGAAGCCACGGGCGATGATTTAAAAGAGTATTTTCTAGCTTCGCAAATGGCAACGATTGGTCATACACTTGAAATACTAAAAGTGGCTGGAAAAATTAACGGGAGTTTGCATCTCGACATTCCTTTTGATGGCGAGCAGGTGGTCGCTTCTGGTCAGGTAAACTTAAACAATAACGATGTCACATTAGCCTTTATGGATACCACCCTAGAAGGTGTTACGGGACAATTTCGTTACCATAATGATAAATTAGAGAGTGATACTTTAACCGCGAATTGGTTTGGTCAACCTCTGACATTTTCTTTTGCTGGTGGTGATCAACGGGATGCTTATCAAGTTGGTGTTGATCTAAAAGGACAATGGGATATCGGGAAAATTAAGGGATTACCTAATGATATACAACATAAATTAAGCGGTTTTTTACCTTGGCATGGCGCGGTGAGTGTTAATATTCCAGAAACAGCGGATGTTAATTATCAAGTGGATCTGACCGGACAAGTGAATGCGCTACAAAGTCAGTTAGCTGCGCCAAGTACCGATGACTTTAAAAACGCTTCCCCCATTGTGATTTCAGCAAAAGGGAATAGTGAAAAACTTAACGTTAGTGCCGATGCACAAGATCAGTGGTCATTAAATAGTGAATGGGCGTTAGGTGAACCATTACGTCTATTACAAGGTAATTTAGTCTCTTCCTCGCTCACACTACCTCAATTAAATGATCAATCACGATTGACTATTGCTTTGCAGGGATTGCAAGGCGATAAATGGCTACCTACTTTAATGGCTTTTTCATCATTAGCCCCTTCTGAAAACGCGATACGTTTCCCTACCAATATTCATATTAGTCTGCCTGAACTTAATTTTGCTGGTCAGCAATGGATTGCGCCACAAACAGAAATTATGCGTGCTGATGATGGTGTAAAATTATCCTTCTCAGGGAGTGAGTTACGAGGTGACTTATTTGTACCCAATACGGCACAACCTTGGCAGGTGAATATTACCTATCTCTATTTTAATGGCGCTAGCCCAACAGAAGAAAATAAATCCTTAAAAATGGCAAATGTGCCTGATGCCAAAAAAGCAGTTCAATTTTCACTTAAAGATATTCCTGCTATCAATTTCGCCTGCCAAGAGTGTTGGGTGAATGGATTATTACTAGGGAATATTGAAGGTGCAATACAGCCTCGTGACGGAGCATTATTGTTAACTGCAGGTAAGCTTAAAAATAGCAGTGGCGAGCTATCTGTGAGTGGTGTGTGGTCAGAAGATAGTTTAGGCAACAGTATCACTAAGTTGGCAGGTAAACTAACGGCACCGGAAGTCGATGAAATGGCGGCTTACTTTGGTTATATCATTCCGATTGTTCAGTCACCACTTACGGCAGATTTCTCACTGCAGTGGCACAATACCCCTTGGAATTTTGATCTAAAAACACTCAATGGTGAAGTGAATGCTTCTCTTGGAAAAGGGCGTATTGAAAAGGTGGATGTTGGGCAAGCGGGAAAATTATTACGTCTAGTCAGTTTTGATGCCCTGTTACGTAAGTTGCAATTCGACTTTAGAGATACTTTTAGTGATAATTTTGAGTATGATTCCATTAAAGGTGATTTGACGATTAAACAAGGTGTTTTAAACGCGAAAAGTGTTGCTGTAGATGGTGTTATTGCCGATATTGCTATAAAAGGTCAAGTGGATCTGTTGGCGCGTAAAATGGACTTACAAGTAGTGGTAACTCCTGAAATATCAGCTACAGTAGGCGTTGCTACCGCATTTGCTATTAACCCCATCGCTGGTGCTGCTGTATTTGCAGCTTCAAAAGTACTGGGGCCACTTTGGAGTAAGATTTCAGTTATACGTTATCATGTTACCGGAACGGTAGAACAACCCAAGATTGACGAAGTACTGCGTCAACTTAAGGAGGATCAGGCGTTATGAAAAAAGTTAATGTCGCACTTTTGCAGCTTTGTAGCGGAAAAAATATAAAA