Homologs in group_747

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_03325 FBDBKF_03325 84.8 Morganella morganii S1 yhdP AsmA2 domain-containing protein YhdP
EHELCC_07210 EHELCC_07210 84.8 Morganella morganii S2 yhdP AsmA2 domain-containing protein YhdP
NLDBIP_07535 NLDBIP_07535 84.8 Morganella morganii S4 yhdP AsmA2 domain-containing protein YhdP
LHKJJB_07070 LHKJJB_07070 84.8 Morganella morganii S3 yhdP AsmA2 domain-containing protein YhdP
HKOGLL_03860 HKOGLL_03860 84.8 Morganella morganii S5 yhdP AsmA2 domain-containing protein YhdP
PMI_RS18090 PMI_RS18090 45.1 Proteus mirabilis HI4320 yhdP AsmA2 domain-containing protein YhdP

Distribution of the homologs in the orthogroup group_747

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_747

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P46474 0 1034 42 11 1272 3 yhdP Uncharacterized protein YhdP Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS11610
Feature type CDS
Gene yhdP
Product AsmA2 domain-containing protein YhdP
Location 472542 - 476315 (strand: 1)
Length 3774 (nucleotides) / 1257 (amino acids)

Contig

Accession term accessions NZ_VXKB01000002 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 573139 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_747
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF13116 Protein of unknown function
PF13502 AsmA-like C-terminal region

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3164 Function unknown (S) S Uncharacterized conserved protein YhdP, contains DUF3971 and AsmA2 domains

Protein Sequence

MRRLPKVLFTCVVVIVIAAALLLGGLRYLLPQINEYRPQIEEKLSEMTGATVKMGEISGRWQGFGPVLTIRDLTVTSDEADISAEKINLSLDIWRTLFRFSVSFRDLTFWHMNVDYKSPLSSDGGNFEPDAISALWLERFDNFDLRDSEIRFLTPSGDPATLVVSRLSWLNQTKRHRAQGEVRLSSVNNPRGWLQVRLDLRDVNGLLDEGMVYLQADEIDMTPWFSRWLRDNTGLNEARFSLAGWMTVERGTITRGLVQLNTGEADWLVGKDRHTLEVRDLVVRMRRQGEGWLFNIPELFNLKTDGQQWPEGNLSLLYIPASEKYQGNQHLRIRANNIELARLSSIVPTFSFLTNDDVRAWQNRDPSGLIQDFALDITPATPEMLDVDVAWQDVSWKPWGGLPSVSHFSGLLRGDRAKGIMRFALADSVVDYRPMFTAPLAVSQSGGQIQWRNTDGNFSAWSDNLDLRSGALWTNGHFRYQQNKEGPPSLGILAGVRLTDAGEAWRYFPVPLMGEHLNEYLTQALIAGKAEDATVIFQGDPADFPFRKNQGQFQIWVPLRDATFKYDPDWPALMDVDVDLNFHNHGLWMTAPQAKLGNATARNLKADIPDFTIERLYIKSDIEGKGESLGNYFDQTPMKDSIGNTLKQLKIGGSVYGNLNLEIPLNFDEMVRATGEVRLKNNTIDVVPLGSTLHDVSGQFRFDNGDLESDRITARWFGQPLNIHFTTKENPKDFAVNIALDGNWQMKGIDGLPDAVKQHVKGAFPWTGEVKIALPQKGEVSYTVDLDGKTGKLTSSTLPAIQRWAADTGTLNIHATGTEHTLKAGGTLGKSLSFLTDWTLGDILTLRGAAIRPGSKIPEKIIPDTISIALPAVTGEHWVGALAVAGQSHESPSSLKLPGNIDISAPSVDFAGQRWNQMKLRIHPQENGWLLSADGKELRGDIRLPPSGPWQASIDYLYYNPDSIENALPKSQRSEQTKTDYRVASWPAITLRCEACWVGGLNIGTVNAKVYPENNTLVLDAASVKNSASELTVSGRWDAGRTPLSHFKGQFKGPVFDNMAAYFGVLVPITGSPFTVDFDLNWRDVPWSPDVASLNGIINTSLGKGAMERMGGGNAGKLLRLVSFDALLRKLQLDFTDTFSNDFVFDSIRGKGVIKEGVLSTNDTRVDGLMADISFDGSIYLVERRIDMSVVVTPELSATVGVATAFVVNPIAGAAVFVASKVLGPLWSKISVIRYHLSGSLEEPKIDEVLRQLKETK

Flanking regions ( +/- flanking 50bp)

ACAGTATCCGGTATCACCGGCCTTGACAGCAGCAGGGAGAAGGGGAGCCAGTGAGGCGACTGCCAAAGGTTTTGTTTACATGTGTTGTTGTGATTGTGATTGCTGCTGCTCTGTTACTGGGCGGTCTGCGTTACCTATTGCCTCAGATTAATGAATATCGCCCGCAAATCGAAGAAAAACTCTCTGAGATGACCGGAGCGACAGTCAAAATGGGTGAAATCAGCGGACGCTGGCAGGGTTTTGGTCCTGTACTGACCATCCGTGACCTGACGGTTACCAGTGATGAAGCTGATATATCAGCCGAAAAAATTAATCTCTCCCTCGATATCTGGCGCACCTTATTCCGCTTTAGTGTCAGTTTTCGTGACCTGACATTCTGGCATATGAATGTGGATTACAAATCCCCTCTCAGCAGTGACGGCGGCAATTTTGAGCCGGATGCCATTTCTGCCCTCTGGCTTGAACGTTTTGATAATTTTGACCTGCGTGACAGTGAAATCCGTTTTCTTACCCCGTCCGGCGACCCCGCTACCTTAGTGGTTTCCCGCCTCTCCTGGCTTAATCAGACCAAGCGCCACCGGGCACAGGGCGAAGTCCGGCTCTCATCCGTGAATAACCCGCGCGGCTGGTTACAGGTGCGCCTGGATCTGCGGGATGTGAATGGTCTGCTGGATGAAGGTATGGTGTATCTCCAGGCGGATGAAATTGACATGACGCCGTGGTTCAGCCGCTGGCTGCGGGATAACACCGGACTGAATGAAGCCCGTTTCAGTCTTGCCGGCTGGATGACGGTTGAGCGCGGGACAATCACCCGCGGGCTGGTACAACTGAATACCGGCGAGGCGGACTGGCTGGTCGGCAAAGACAGACACACGCTGGAAGTCCGCGACCTGGTTGTGCGCATGCGCCGTCAGGGCGAAGGCTGGTTGTTTAATATTCCTGAGCTGTTTAACCTCAAAACAGACGGACAACAGTGGCCGGAAGGTAATTTATCACTGCTTTATATCCCCGCATCAGAAAAATATCAGGGCAATCAGCATTTGCGTATCCGCGCCAATAATATTGAATTGGCGCGCCTGAGCAGCATTGTACCGACATTTTCTTTCCTGACGAATGATGATGTCAGAGCCTGGCAGAACCGCGACCCGTCCGGGTTGATTCAGGACTTTGCCCTTGATATCACGCCTGCCACCCCGGAAATGCTGGATGTGGATGTGGCCTGGCAGGATGTGAGCTGGAAACCCTGGGGCGGGCTGCCGTCAGTCTCTCATTTCAGCGGGCTGCTGCGCGGTGATCGGGCAAAAGGCATTATGCGTTTTGCCCTGGCGGACAGCGTGGTGGACTATCGTCCGATGTTTACCGCGCCGCTGGCTGTTTCGCAGAGTGGCGGACAAATCCAGTGGCGCAATACCGACGGTAATTTCAGTGCCTGGAGTGATAATTTAGATCTGCGCTCCGGCGCATTATGGACAAACGGGCACTTCCGTTATCAGCAAAATAAAGAGGGTCCGCCGTCACTCGGGATCCTGGCGGGTGTCCGGCTGACGGACGCCGGAGAAGCCTGGCGCTATTTCCCCGTTCCGCTGATGGGCGAACATCTCAATGAATACCTGACTCAGGCGCTGATTGCCGGGAAAGCGGAAGACGCCACGGTAATCTTTCAGGGAGATCCTGCTGATTTTCCGTTCCGCAAAAATCAGGGGCAGTTTCAGATATGGGTGCCGCTGCGTGATGCCACGTTCAAATACGACCCGGACTGGCCTGCACTGATGGATGTGGATGTCGATCTGAATTTTCATAATCACGGGTTATGGATGACGGCTCCGCAGGCGAAACTGGGTAACGCAACCGCACGGAACCTGAAAGCCGATATTCCGGACTTTACGATTGAGCGCCTTTATATTAAGTCAGATATTGAGGGGAAAGGGGAGTCGCTGGGGAACTATTTTGATCAGACCCCGATGAAAGACTCCATCGGCAATACCCTGAAACAGCTGAAAATTGGCGGCAGTGTCTACGGTAACCTTAACCTGGAAATTCCGCTCAATTTTGATGAAATGGTGCGGGCGACCGGTGAGGTCCGCCTGAAAAATAATACTATTGATGTCGTGCCGCTCGGCAGCACGCTGCATGATGTCTCCGGGCAGTTCCGTTTTGATAACGGCGACCTGGAAAGTGATCGCATTACTGCGCGCTGGTTCGGTCAACCGCTGAATATTCACTTCACGACCAAAGAAAATCCGAAAGATTTTGCGGTTAATATCGCACTGGACGGCAACTGGCAGATGAAAGGGATTGATGGCCTTCCTGATGCCGTAAAACAGCATGTAAAGGGTGCTTTTCCGTGGACGGGCGAGGTGAAAATTGCGCTTCCGCAAAAAGGAGAAGTCAGTTATACGGTTGATCTGGATGGTAAAACCGGAAAGCTGACCAGCAGCACGCTACCTGCAATCCAGCGCTGGGCGGCTGACACCGGCACACTGAATATTCATGCCACAGGAACAGAGCACACACTGAAAGCGGGGGGAACGCTCGGAAAATCCCTCAGTTTTCTGACAGACTGGACACTCGGCGATATTCTGACTCTGCGCGGTGCCGCTATCCGTCCGGGTAGTAAAATACCGGAAAAAATCATCCCTGATACCATCAGTATTGCGTTACCGGCGGTGACAGGGGAGCACTGGGTCGGCGCTCTGGCTGTTGCAGGGCAAAGTCATGAATCGCCTTCATCACTGAAACTGCCGGGGAATATTGATATTTCAGCGCCAAGTGTGGATTTTGCCGGACAGCGCTGGAATCAGATGAAACTGCGCATCCATCCGCAGGAAAATGGCTGGTTGCTGAGTGCGGACGGAAAGGAGCTGCGCGGTGATATCCGCCTCCCGCCGTCCGGACCGTGGCAGGCAAGCATTGACTATCTTTATTATAATCCGGACTCCATTGAGAACGCATTGCCGAAATCTCAGCGTAGTGAGCAGACCAAAACAGATTACCGGGTCGCAAGCTGGCCGGCAATCACGTTGCGTTGTGAGGCGTGCTGGGTCGGCGGGTTGAATATCGGTACGGTGAATGCCAAGGTTTATCCTGAAAATAACACCCTGGTTCTGGATGCGGCATCGGTAAAAAACAGTGCCAGCGAGCTGACGGTCAGCGGACGCTGGGATGCGGGGCGTACACCACTATCGCACTTTAAAGGTCAGTTTAAAGGGCCGGTATTTGATAATATGGCTGCGTATTTCGGGGTACTGGTGCCGATCACCGGCTCGCCGTTTACCGTGGATTTTGACCTGAACTGGCGTGATGTGCCGTGGTCGCCTGATGTGGCGTCACTGAACGGCATCATTAATACCTCGCTGGGGAAAGGAGCCATGGAGCGTATGGGCGGCGGAAATGCCGGAAAACTACTGCGGCTGGTCAGTTTTGATGCGTTATTACGTAAATTACAGCTGGATTTCACTGATACCTTCAGTAATGATTTTGTTTTTGACAGCATACGCGGCAAAGGTGTCATCAAAGAAGGTGTTCTGAGTACGAATGATACCCGCGTGGATGGTCTGATGGCGGATATCAGTTTTGATGGTTCGATTTATCTTGTGGAGCGTCGCATTGATATGTCGGTGGTAGTCACACCGGAATTGTCTGCGACAGTCGGGGTGGCAACGGCGTTTGTTGTCAATCCGATAGCGGGAGCTGCGGTCTTTGTTGCCAGTAAGGTACTGGGCCCGCTCTGGAGTAAAATTTCGGTGATACGTTATCACCTGAGCGGCAGTTTAGAAGAGCCTAAGATAGATGAAGTTTTGCGTCAGTTAAAGGAGACTAAGTAATGAAAAACGCAAATGTGGCATTATTACAATTGTGCAGCGGCACAAATACC