Homologs in group_4735

Help

0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4735

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_4735

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q7CPJ9 1.71e-25 96 41 3 122 1 panM PanD regulatory factor Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P37613 7.26e-24 92 42 3 122 1 panZ PanD regulatory factor Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS17965
Feature type CDS
Gene panM
Product aspartate 1-decarboxylase autocleavage activator PanM
Location 3948188 - 3948604 (strand: -1)
Length 417 (nucleotides) / 138 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_4735
Orthogroup size 1
N. genomes 1

Actions

Genomic region

Domains

PF12568 Acetyltransferase (GNAT) domain, PanZ

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1246 Amino acid transport and metabolism (E) E N-acetylglutamate synthase or related acetyltransferase, GNAT family

Protein Sequence

MKLTIEKLPQLSAQDKIDLGKIWQDSEYQMALTAPITTEHALFVARFNGRLLAACRIKYQAKTALISDFMVREVTRRRGVGHYLLTQCLEKNPTITHWQALLKTGQINDPVAQAFLAHHHFTTSLQADTYDYLCNDKA

Flanking regions ( +/- flanking 50bp)

CTTTCCACATTAAAACAGCAACGACAAACCATCGACTAACAGGACATTTGATGAAACTAACCATTGAAAAACTGCCGCAGCTTTCAGCACAAGATAAAATAGATTTAGGGAAAATTTGGCAAGATAGTGAGTACCAAATGGCACTCACTGCACCAATCACCACAGAGCATGCTCTTTTTGTCGCCCGTTTTAACGGGCGATTACTAGCGGCTTGTCGTATAAAATACCAAGCAAAAACAGCGCTTATCAGTGATTTTATGGTAAGAGAAGTGACTCGTCGTCGTGGTGTTGGGCATTACTTACTAACACAATGCCTTGAAAAAAATCCAACCATTACACATTGGCAAGCTTTATTGAAAACAGGGCAAATCAACGATCCTGTAGCACAGGCTTTTTTAGCGCATCATCATTTTACTACTTCATTACAGGCTGATACTTATGATTATTTATGCAATGATAAAGCATAAAGCCTCGCTATATTATAAGCGGTTTCCTGTAAGTTTTGCTTAGCATTATC