COG1246


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1246, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 20 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description N-acetylglutamate synthase or related acetyltransferase, GNAT family
Function(s) descr. Amino acid transport and metabolism (E)

Occurence in the database

COG1246 is associated with 20 different proteins (see tab "Protein list" and "Profile")
The 20 proteins are classified into 7 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2544 FBDBKF_02485 192287 192733 1 N-acetyltransferase Morganella morganii S1
1 group_3227 FBDBKF_03450 96387 96857 -1 rimI Ribosomal protein S18 acetylase RimI and related acetyltransferases Morganella morganii S1
2 group_1428 FBDBKF_08825 144311 144820 -1 rimI Ribosomal protein S18 acetylase RimI and related acetyltransferases Morganella morganii S1
3 group_2544 EHELCC_02955 580107 580553 1 N-acetyltransferase Morganella morganii S2
4 group_3227 EHELCC_07085 150246 150716 1 rimI Ribosomal protein S18 acetylase RimI and related acetyltransferases Morganella morganii S2
5 group_1428 EHELCC_12700 18905 19414 1 rimI Ribosomal protein S18 acetylase RimI and related acetyltransferases Morganella morganii S2
6 group_2544 NLDBIP_00505 99583 100029 -1 N-acetyltransferase Morganella morganii S4
7 group_3227 NLDBIP_07410 150119 150589 1 rimI Ribosomal protein S18 acetylase RimI and related acetyltransferases Morganella morganii S4
8 group_1428 NLDBIP_13040 18905 19414 1 rimI Ribosomal protein S18 acetylase RimI and related acetyltransferases Morganella morganii S4
9 group_2544 LHKJJB_01530 292656 293102 1 N-acetyltransferase Morganella morganii S3
10 group_3227 LHKJJB_06945 113865 114335 1 rimI Ribosomal protein S18 acetylase RimI and related acetyltransferases Morganella morganii S3
11 group_1428 LHKJJB_13515 143029 143538 -1 rimI Ribosomal protein S18 acetylase RimI and related acetyltransferases Morganella morganii S3
12 group_2544 HKOGLL_01570 298167 298613 1 N-acetyltransferase Morganella morganii S5
13 group_3227 HKOGLL_03985 119052 119522 -1 rimI Ribosomal protein S18 acetylase RimI and related acetyltransferases Morganella morganii S5
14 group_1428 HKOGLL_11515 18905 19414 1 rimI Ribosomal protein S18 acetylase RimI and related acetyltransferases Morganella morganii S5
15 group_4290 PMI_RS00755 193491 193901 -1 GNAT family N-acetyltransferase Proteus mirabilis HI4320
16 group_420 PMI_RS03910 883315 883845 1 GNAT family N-acetyltransferase Proteus mirabilis HI4320
17 group_1334 PMI_RS16510 3641730 3642443 1 rffC dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase Proteus mirabilis HI4320
18 group_1428 PMI_RS17250 3786745 3787254 -1 GNAT family N-acetyltransferase Proteus mirabilis HI4320
19 group_4735 PMI_RS17965 3948188 3948604 -1 panM aspartate 1-decarboxylase autocleavage activator PanM Proteus mirabilis HI4320