Homologs in group_2219

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_16955 FBDBKF_16955 69.2 Morganella morganii S1 oca4 Protein tyrosine/serine phosphatase Oca4
EHELCC_16635 EHELCC_16635 69.2 Morganella morganii S2 oca4 Protein tyrosine/serine phosphatase Oca4
NLDBIP_16845 NLDBIP_16845 69.2 Morganella morganii S4 oca4 Protein tyrosine/serine phosphatase Oca4
LHKJJB_16625 LHKJJB_16625 69.2 Morganella morganii S3 oca4 Protein tyrosine/serine phosphatase Oca4
HKOGLL_17590 HKOGLL_17590 69.2 Morganella morganii S5 oca4 Protein tyrosine/serine phosphatase Oca4
F4V73_RS18425 F4V73_RS18425 69.1 Morganella psychrotolerans - tyrosine-protein phosphatase

Distribution of the homologs in the orthogroup group_2219

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2219

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
I6WXK4 1.84e-18 85 26 7 288 1 ptpB Triple specificity protein phosphatase PtpB Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P40289 5.59e-12 67 28 7 233 3 H16_A0669 Putative tyrosine-protein phosphatase H16_A0669 Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337)
Q05918 0.000551 44 22 7 230 1 iphP Tyrosine-protein phosphatase Nostoc commune

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS17560
Feature type CDS
Gene -
Product tyrosine-protein phosphatase
Location 3855367 - 3856149 (strand: 1)
Length 783 (nucleotides) / 260 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_2219
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF13350 Tyrosine phosphatase family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2365 Signal transduction mechanisms (T) T Protein tyrosine/serine phosphatase Oca4

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K01104 protein-tyrosine phosphatase [EC:3.1.3.48] - -

Protein Sequence

MTDILQTHPSVLPLTGGINFRDLGGKKLSNGGIIKPGLLFRSGSLDRLTDTDQALLIDKNLFQILDYRDTGEIVDKPDRVWEGAQYYHAPANPLSKEVSANLEKLTPEILEQFDAKAFMFQLYKLLPINNPAYKQLATLLKQPEKGGVIQHCAVGKDRTGVGSALVLFALGASLDVVMEDYLLTNETLAPFRAYLLEEHAKTLSENVVNKFAYVYSVQEEFLQTALASINQHYGNIDTWLEKDIGLDAQSRESLQNYFLE

Flanking regions ( +/- flanking 50bp)

TCTGTTAAGGTCTTGATGGTCTTAACAATACAACAATGAGAAGAGGCATTATGACTGATATCTTACAAACACATCCTTCGGTGTTGCCTTTAACAGGTGGGATTAACTTTCGTGATCTAGGGGGAAAAAAGCTCAGTAATGGCGGTATTATCAAACCCGGCTTACTCTTTCGCTCCGGTTCACTGGATAGATTAACGGATACCGATCAAGCGCTTCTTATTGATAAAAATCTTTTTCAAATCTTAGACTATCGTGACACAGGTGAAATTGTTGATAAGCCGGATCGAGTATGGGAAGGGGCACAATATTACCATGCTCCAGCTAATCCATTATCGAAAGAAGTGTCAGCTAACCTTGAAAAACTCACCCCAGAAATACTGGAACAGTTTGATGCTAAAGCATTTATGTTTCAGCTATATAAATTACTACCTATTAATAATCCGGCTTATAAACAGTTGGCAACGTTGTTGAAGCAACCAGAAAAAGGCGGTGTCATACAACATTGTGCAGTAGGTAAAGATAGAACGGGGGTGGGCTCTGCTTTAGTTCTATTTGCCTTAGGGGCCTCATTAGATGTGGTGATGGAAGATTACTTACTCACCAATGAAACATTAGCGCCTTTCCGCGCTTATCTTTTAGAAGAGCATGCTAAAACACTGAGTGAAAATGTGGTGAATAAATTTGCGTATGTTTATTCAGTACAAGAAGAGTTCCTGCAAACAGCCCTTGCCAGTATTAATCAACACTATGGCAATATCGATACTTGGCTTGAAAAAGATATTGGCTTGGATGCGCAAAGTAGAGAAAGCTTACAAAACTATTTTCTCGAATAGTGAAGTGATTTATATTCGGTTAAAGATGTTGTGCTTTTTTACTGAAATTA