COG2050


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG2050, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 8 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Acyl-CoA thioesterase PaaI, contains HGG motif
Function(s) descr. Secondary metabolites biosynthesis, transport and catabolism (Q)

Occurence in the database

COG2050 is associated with 8 different proteins (see tab "Protein list" and "Profile")
The 8 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1035 FBDBKF_05835 169657 170082 -1 paaI Acyl-CoA thioesterase PaaI, contains HGG motif Morganella morganii S1
1 group_1035 EHELCC_11755 11412 11837 1 paaI Acyl-CoA thioesterase PaaI, contains HGG motif Morganella morganii S2
2 group_1035 NLDBIP_12095 11367 11792 1 paaI Acyl-CoA thioesterase PaaI, contains HGG motif Morganella morganii S4
3 group_1035 LHKJJB_11955 11412 11837 1 paaI Acyl-CoA thioesterase PaaI, contains HGG motif Morganella morganii S3
4 group_1035 HKOGLL_10570 11412 11837 1 paaI Acyl-CoA thioesterase PaaI, contains HGG motif Morganella morganii S5
5 group_1035 F4V73_RS03490 747160 747585 1 hotdog fold thioesterase Morganella psychrotolerans
6 group_1035 PMI_RS06860 1496941 1497354 -1 hotdog fold thioesterase Proteus mirabilis HI4320
7 group_4694 PMI_RS16630 3665550 3666017 -1 thioesterase family protein Proteus mirabilis HI4320