Homologs in group_1329

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_08225 FBDBKF_08225 63.6 Morganella morganii S1 wzzE ECA polysaccharide chain length modulation protein
EHELCC_13300 EHELCC_13300 63.6 Morganella morganii S2 wzzE ECA polysaccharide chain length modulation protein
NLDBIP_13640 NLDBIP_13640 63.6 Morganella morganii S4 wzzE ECA polysaccharide chain length modulation protein
LHKJJB_12915 LHKJJB_12915 63.6 Morganella morganii S3 wzzE ECA polysaccharide chain length modulation protein
HKOGLL_12115 HKOGLL_12115 63.6 Morganella morganii S5 wzzE ECA polysaccharide chain length modulation protein
F4V73_RS18775 F4V73_RS18775 63.0 Morganella psychrotolerans wzzE ECA polysaccharide chain length modulation protein

Distribution of the homologs in the orthogroup group_1329

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_1329

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
O33789 5.59e-153 436 60 1 341 3 wzzE ECA polysaccharide chain length modulation protein Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0AG02 6.36e-151 431 61 1 335 3 wzzE ECA polysaccharide chain length modulation protein Shigella flexneri
P0AG00 6.36e-151 431 61 1 335 1 wzzE ECA polysaccharide chain length modulation protein Escherichia coli (strain K12)
P0AG01 6.36e-151 431 61 1 335 1 wzzE ECA polysaccharide chain length modulation protein Escherichia coli O157:H7
Q05032 1.64e-16 82 24 8 348 3 wzzB Chain length determinant protein Escherichia coli O111:H-
P76372 7.38e-16 80 22 7 346 1 wzzB Chain length determinant protein Escherichia coli (strain K12)
O33953 1.11e-15 80 22 7 345 3 wzzB Chain length determinant protein Escherichia coli
P95730 1.92e-15 79 25 12 353 3 wzzB Chain length determinant protein Shigella dysenteriae
P35272 2.58e-15 79 25 13 355 1 wzzB Chain length determinant protein Escherichia coli
P37792 3.12e-15 79 25 12 353 1 wzzB Chain length determinant protein Shigella flexneri
P26266 4.17e-12 70 23 8 352 1 fepE Ferric enterobactin transport protein FepE Escherichia coli (strain K12)
Q04866 5.22e-12 69 23 10 346 1 wzzB Chain length determinant protein Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P44063 2.8e-11 65 25 3 178 4 HI_0866 Uncharacterized protein HI_0866 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS16485
Feature type CDS
Gene wzzE
Product ECA polysaccharide chain length modulation protein
Location 3636211 - 3637269 (strand: 1)
Length 1059 (nucleotides) / 352 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1329
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF02706 Chain length determinant protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3765 Cell wall/membrane/envelope biogenesis (M) M LPS O-antigen chain length determinant protein, WzzB/FepE family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K05790 lipopolysaccharide biosynthesis protein WzzE - -

Virulence factor Annotation(s)

VF gene ID Protein VF ID Category
VFG023778 ECA polysaccharide chain length modulation protein VF0392 Immune modulation

Protein Sequence

MNSENNVSRQGFSPDNELDIRGLCCALWSGKRWIIGFALLFALIALGASYLMQPKWSAIAMTERPTVNNLGSYYSQSQFLRNLDTQINPSVTVSQLSIPDEAYQEFVTQISAFDTRREFWLQTDYYKQRKENDAQADAALLDELINNIQFTPADEKKLVNDQLKLIAETANDSSQLLNEYIAFANKRAAEHLNEEVIAAWATRTQSMKALVKRQEMAAQAAYQRQINLLKQSIKVAEKQGISQKQTSIAIDELPDSKLFLLGVPLLQSQLETLMATGPDFDSDYDQNTAMLSTLAVGAKLQDNFQTYRFLRTPEDPVKRDSPRRAFMMVLWGAIGVLVGAGVALVRRSSLKK

Flanking regions ( +/- flanking 50bp)

CGTAAAGCGACACAACTTAAGCATTAAATAAGCAGAGGTCTTTTAACGTGATGAACTCGGAAAATAACGTCTCCCGACAGGGGTTTTCACCCGATAATGAACTCGATATTCGAGGTCTTTGTTGTGCACTATGGTCAGGAAAACGCTGGATAATAGGGTTCGCGCTGCTTTTTGCGCTGATTGCATTAGGGGCATCTTACTTGATGCAACCTAAATGGAGCGCTATTGCGATGACAGAGAGACCTACTGTGAATAATTTAGGTAGTTATTATTCTCAGTCTCAGTTCTTACGTAATCTTGATACGCAAATTAATCCGTCTGTAACTGTTTCTCAGTTAAGTATCCCTGATGAAGCTTATCAAGAGTTTGTAACACAGATTTCAGCTTTTGATACACGACGTGAGTTTTGGCTGCAAACGGATTATTACAAACAACGTAAAGAAAATGATGCGCAAGCAGACGCGGCATTATTAGATGAGCTCATCAATAATATTCAATTTACACCGGCTGATGAGAAGAAATTGGTTAATGATCAATTGAAACTCATTGCTGAAACGGCCAACGATTCGAGTCAACTGCTCAATGAATATATCGCTTTTGCGAATAAACGTGCGGCAGAGCATCTAAATGAAGAAGTGATTGCCGCATGGGCAACTCGAACACAATCGATGAAAGCCTTAGTGAAACGCCAAGAAATGGCCGCTCAAGCTGCTTATCAACGACAAATTAATTTACTCAAACAATCGATTAAAGTTGCTGAGAAACAAGGTATTTCTCAAAAACAGACCTCGATTGCGATAGATGAATTACCGGATTCGAAGCTGTTTCTACTCGGCGTGCCTTTATTGCAATCACAGTTAGAAACATTAATGGCAACAGGACCAGATTTTGATAGTGATTATGATCAAAATACGGCAATGTTATCCACCCTCGCGGTAGGTGCTAAATTACAAGATAACTTCCAAACTTACCGTTTCTTACGTACACCTGAAGATCCTGTGAAACGAGATAGTCCTCGCCGTGCCTTTATGATGGTGCTTTGGGGTGCTATTGGTGTTTTAGTGGGCGCGGGTGTGGCATTAGTCAGACGTAGTTCATTAAAAAAATAATCATTATTACCTTTTTATCATTTTAATAATAACGAGACATCAGGTGTATT