Homologs in group_3895

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1 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
PMI_RS09545 PMI_RS09545 68.9 Proteus mirabilis HI4320 - LutB/LldF family L-lactate oxidation iron-sulfur protein

Distribution of the homologs in the orthogroup group_3895

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3895

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P77536 0.0 771 74 0 472 3 ykgF Uncharacterized electron transport protein YkgF Escherichia coli (strain K12)
A4IK95 0.0 566 56 2 471 3 lutB Lactate utilization protein B Geobacillus thermodenitrificans (strain NG80-2)
Q5WJE0 0.0 563 56 1 471 3 lutB Lactate utilization protein B Shouchella clausii (strain KSM-K16)
Q5L301 0.0 555 55 2 471 3 lutB Lactate utilization protein B Geobacillus kaustophilus (strain HTA426)
C5D586 0.0 553 55 2 471 3 lutB Lactate utilization protein B Geobacillus sp. (strain WCH70)
A8FDN5 0.0 552 54 3 474 3 lutB Lactate utilization protein B Bacillus pumilus (strain SAFR-032)
B1HVX5 0.0 552 54 2 471 3 lutB Lactate utilization protein B Lysinibacillus sphaericus (strain C3-41)
Q81GA4 0.0 537 54 2 470 3 lutB Lactate utilization protein B Bacillus cereus (strain ATCC 14579 / DSM 31 / CCUG 7414 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NCTC 2599 / NRRL B-3711)
B7HH59 0.0 537 54 2 470 3 lutB Lactate utilization protein B Bacillus cereus (strain B4264)
B7IMD4 0.0 537 54 2 470 3 lutB Lactate utilization protein B Bacillus cereus (strain G9842)
A9VKN1 0.0 536 54 2 470 3 lutB2 Lactate utilization protein B 2 Bacillus mycoides (strain KBAB4)
B7JF01 0.0 536 54 2 470 3 lutB Lactate utilization protein B Bacillus cereus (strain AH820)
B7GLD5 0.0 536 53 2 472 3 lutB Lactate utilization protein B Anoxybacillus flavithermus (strain DSM 21510 / WK1)
A7Z901 0.0 535 52 2 473 3 lutB Lactate utilization protein B Bacillus velezensis (strain DSM 23117 / BGSC 10A6 / LMG 26770 / FZB42)
Q6HLP1 0.0 535 54 2 470 3 lutB Lactate utilization protein B Bacillus thuringiensis subsp. konkukian (strain 97-27)
Q63E66 0.0 535 54 2 470 3 lutB Lactate utilization protein B Bacillus cereus (strain ZK / E33L)
B9IUP4 0.0 535 54 2 470 3 lutB Lactate utilization protein B Bacillus cereus (strain Q1)
B7I0L0 0.0 535 54 2 470 3 lutB Lactate utilization protein B Bacillus cereus (strain AH187)
C1EM11 0.0 535 54 2 470 3 lutB Lactate utilization protein B Bacillus cereus (strain 03BB102)
Q73BK1 0.0 535 54 2 470 3 lutB Lactate utilization protein B Bacillus cereus (strain ATCC 10987 / NRS 248)
Q81TG1 0.0 535 54 2 470 3 lutB Lactate utilization protein B Bacillus anthracis
A0RBC8 0.0 535 54 2 470 3 lutB Lactate utilization protein B Bacillus thuringiensis (strain Al Hakam)
C3LAQ3 0.0 535 54 2 470 3 lutB Lactate utilization protein B Bacillus anthracis (strain CDC 684 / NRRL 3495)
C3P4C4 0.0 535 54 2 470 3 lutB Lactate utilization protein B Bacillus anthracis (strain A0248)
A7GMJ3 0.0 535 55 2 470 3 lutB Lactate utilization protein B Bacillus cytotoxicus (strain DSM 22905 / CIP 110041 / 391-98 / NVH 391-98)
Q9KBU1 0.0 533 54 2 471 3 lutB Lactate utilization protein B Halalkalibacterium halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
B9E9G9 0.0 532 51 3 473 3 lutB Lactate utilization protein B Macrococcus caseolyticus (strain JCSC5402)
O07021 0.0 527 52 2 474 1 lutB Lactate utilization protein B Bacillus subtilis (strain 168)
Q8ET91 0.0 521 51 1 473 3 lutB Lactate utilization protein B Oceanobacillus iheyensis (strain DSM 14371 / CIP 107618 / JCM 11309 / KCTC 3954 / HTE831)
Q65EM0 0.0 520 53 2 473 3 lutB Lactate utilization protein B Bacillus licheniformis (strain ATCC 14580 / DSM 13 / JCM 2505 / CCUG 7422 / NBRC 12200 / NCIMB 9375 / NCTC 10341 / NRRL NRS-1264 / Gibson 46)
A9VI77 0.0 519 54 2 471 3 lutB1 Lactate utilization protein B 1 Bacillus mycoides (strain KBAB4)
C4L0S1 9.31e-171 491 50 3 450 3 lutB Lactate utilization protein B Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b)
Q9KBU0 1.81e-05 49 29 1 86 3 lutC Lactate utilization protein C Halalkalibacterium halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
P52074 3.87e-05 49 23 4 159 1 glcF Glycolate oxidase iron-sulfur subunit Escherichia coli (strain K12)
P94534 7.28e-05 48 27 4 129 3 glcF Probable glycolate oxidase iron-sulfur subunit Bacillus subtilis (strain 168)
Q8ET90 0.000671 44 25 3 110 3 lutC Lactate utilization protein C Oceanobacillus iheyensis (strain DSM 14371 / CIP 107618 / JCM 11309 / KCTC 3954 / HTE831)
C5D585 0.001 44 35 1 67 3 lutC Lactate utilization protein C Geobacillus sp. (strain WCH70)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS15060
Feature type CDS
Gene -
Product LutB/LldF family L-lactate oxidation iron-sulfur protein
Location 3341057 - 3342475 (strand: -1)
Length 1419 (nucleotides) / 472 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_3895
Orthogroup size 2
N. genomes 1

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Genomic region

Domains

PF02589 LUD domain
PF11870 Lactate utilisation protein B, C-terminal
PF13183 4Fe-4S dicluster domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1139 Energy production and conversion (C) C L-lactate utilization protein LutB, contains a ferredoxin-type domain

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K18929 L-lactate dehydrogenase complex protein LldF - -

Protein Sequence

MSLKTSSLPFKTLIDRQVHDQIMQKAVANAQETIGRNRQKMVDELGHWEDWRDRAAQIRDHVLANLDAYLYQLSEKIEQHGGHVFFAQTKEEASQYILNIAKEKKAKKIVKAKSMVTEEIGLNPVLENAGINVIETDLAEFILQQAKDAPSHVVVPAIHKNRAQIRQIFHDKLGYNGSDTPEEMTRFVRQNIRDDFFTADIGITGCNFAVAETGSVCLVTNEGNARLSTTLPKTHIAVMGMERIAPTFKEVDILITMLARSAVGLRLTGYNTWLTGPKENDNVDGPEDFHLVIVDNGRSKIIGSEFKDILRCIRCGACMNTCPAYRHIGGQGYDSIYPGPVGAVLTPLLGGYKDFKNLPYVCSLCTACDSVCPVKIPLSNLIKKHREVMVEQGITPTTERNITRVFNYVNRHPMLWKVGMNMGAHATKWFIKEGKAPLNIGAIKAWTEARNLPEGDGESFRSWFKKHQKEEK

Flanking regions ( +/- flanking 50bp)

GTTAAAGTGATGCATATTGCGCAAGTATTGATGAGCAATGAGGAGGAATTATGTCATTAAAAACAAGCTCTCTTCCTTTTAAAACGCTAATTGATCGTCAAGTTCACGATCAAATTATGCAAAAAGCCGTTGCTAATGCGCAAGAAACTATTGGCCGTAATCGTCAAAAAATGGTTGATGAATTAGGACACTGGGAGGATTGGCGGGATAGAGCGGCACAAATTCGTGATCATGTACTTGCTAATTTAGATGCCTATTTATATCAATTATCTGAAAAAATAGAACAACATGGTGGGCATGTTTTCTTTGCTCAAACGAAAGAAGAAGCCTCTCAATATATTCTCAATATTGCAAAAGAGAAAAAAGCCAAAAAAATAGTCAAAGCCAAATCAATGGTGACGGAAGAAATTGGCTTAAACCCTGTATTAGAAAATGCAGGTATTAATGTTATTGAAACCGATTTAGCCGAGTTTATTCTTCAACAAGCAAAAGATGCCCCATCTCATGTAGTGGTCCCTGCTATTCATAAAAATAGAGCTCAGATACGTCAAATATTTCATGACAAACTGGGTTATAACGGCTCAGATACACCAGAAGAAATGACGCGTTTTGTTCGCCAGAACATTAGAGACGATTTTTTTACTGCCGATATCGGTATTACGGGGTGTAATTTTGCGGTAGCAGAAACAGGTTCTGTTTGTTTAGTCACTAATGAAGGTAATGCACGATTAAGTACAACATTACCCAAAACGCATATTGCGGTGATGGGGATGGAACGTATTGCACCTACTTTTAAAGAGGTAGATATCTTAATTACCATGTTGGCCCGTAGTGCAGTAGGGTTACGTTTAACGGGCTATAATACATGGCTTACTGGCCCTAAAGAGAATGACAACGTTGATGGCCCAGAAGATTTCCATCTTGTTATTGTAGACAATGGCCGCTCGAAGATCATTGGTTCTGAATTTAAAGATATTTTACGTTGTATCCGTTGTGGTGCTTGTATGAATACTTGCCCTGCTTATCGCCATATTGGCGGTCAAGGATATGATTCTATCTATCCAGGCCCTGTTGGTGCCGTCTTAACGCCACTACTTGGTGGATATAAAGACTTTAAAAACCTGCCTTATGTCTGCTCATTATGTACTGCTTGTGATAGCGTTTGCCCAGTAAAAATACCTTTATCAAATCTTATAAAGAAACATCGTGAAGTTATGGTAGAGCAAGGTATAACACCGACAACTGAACGTAATATTACTCGGGTATTTAATTATGTGAACCGCCATCCTATGTTATGGAAAGTTGGGATGAATATGGGGGCTCATGCTACAAAATGGTTTATTAAAGAAGGTAAAGCGCCATTAAATATCGGTGCAATAAAAGCATGGACAGAAGCGAGAAATTTACCTGAAGGTGATGGTGAAAGTTTTCGTAGTTGGTTTAAAAAACACCAAAAAGAGGAGAAATAAGAGATGGATAACAATAAAGAACGCTTTTTATCAAATCTTGCTTCTCAATT