Homologs in group_3895

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1 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
PMI_RS15060 PMI_RS15060 68.9 Proteus mirabilis HI4320 - LutB/LldF family L-lactate oxidation iron-sulfur protein

Distribution of the homologs in the orthogroup group_3895

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3895

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P77536 0.0 788 76 0 473 3 ykgF Uncharacterized electron transport protein YkgF Escherichia coli (strain K12)
Q5WJE0 0.0 582 57 1 472 3 lutB Lactate utilization protein B Shouchella clausii (strain KSM-K16)
A8FDN5 0.0 581 58 3 472 3 lutB Lactate utilization protein B Bacillus pumilus (strain SAFR-032)
B1HVX5 0.0 568 55 3 473 3 lutB Lactate utilization protein B Lysinibacillus sphaericus (strain C3-41)
Q9KBU1 0.0 566 57 2 467 3 lutB Lactate utilization protein B Halalkalibacterium halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
B9E9G9 0.0 564 56 5 482 3 lutB Lactate utilization protein B Macrococcus caseolyticus (strain JCSC5402)
C5D586 0.0 562 56 2 475 3 lutB Lactate utilization protein B Geobacillus sp. (strain WCH70)
A7Z901 0.0 558 55 6 481 3 lutB Lactate utilization protein B Bacillus velezensis (strain DSM 23117 / BGSC 10A6 / LMG 26770 / FZB42)
B7GLD5 0.0 555 55 2 472 3 lutB Lactate utilization protein B Anoxybacillus flavithermus (strain DSM 21510 / WK1)
A9VKN1 0.0 554 57 2 474 3 lutB2 Lactate utilization protein B 2 Bacillus mycoides (strain KBAB4)
Q81GA4 0.0 551 57 2 474 3 lutB Lactate utilization protein B Bacillus cereus (strain ATCC 14579 / DSM 31 / CCUG 7414 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NCTC 2599 / NRRL B-3711)
B7HH59 0.0 551 57 2 474 3 lutB Lactate utilization protein B Bacillus cereus (strain B4264)
B7IMD4 0.0 551 57 2 474 3 lutB Lactate utilization protein B Bacillus cereus (strain G9842)
O07021 0.0 550 55 5 471 1 lutB Lactate utilization protein B Bacillus subtilis (strain 168)
A7GMJ3 0.0 550 57 2 474 3 lutB Lactate utilization protein B Bacillus cytotoxicus (strain DSM 22905 / CIP 110041 / 391-98 / NVH 391-98)
Q6HLP1 0.0 550 56 2 474 3 lutB Lactate utilization protein B Bacillus thuringiensis subsp. konkukian (strain 97-27)
Q63E66 0.0 550 56 2 474 3 lutB Lactate utilization protein B Bacillus cereus (strain ZK / E33L)
B9IUP4 0.0 550 56 2 474 3 lutB Lactate utilization protein B Bacillus cereus (strain Q1)
B7I0L0 0.0 550 56 2 474 3 lutB Lactate utilization protein B Bacillus cereus (strain AH187)
C1EM11 0.0 550 56 2 474 3 lutB Lactate utilization protein B Bacillus cereus (strain 03BB102)
Q73BK1 0.0 550 56 2 474 3 lutB Lactate utilization protein B Bacillus cereus (strain ATCC 10987 / NRS 248)
Q81TG1 0.0 550 56 2 474 3 lutB Lactate utilization protein B Bacillus anthracis
A0RBC8 0.0 550 56 2 474 3 lutB Lactate utilization protein B Bacillus thuringiensis (strain Al Hakam)
C3LAQ3 0.0 550 56 2 474 3 lutB Lactate utilization protein B Bacillus anthracis (strain CDC 684 / NRRL 3495)
C3P4C4 0.0 550 56 2 474 3 lutB Lactate utilization protein B Bacillus anthracis (strain A0248)
B7JF01 0.0 549 56 2 474 3 lutB Lactate utilization protein B Bacillus cereus (strain AH820)
Q5L301 0.0 546 55 2 473 3 lutB Lactate utilization protein B Geobacillus kaustophilus (strain HTA426)
Q65EM0 0.0 545 56 2 472 3 lutB Lactate utilization protein B Bacillus licheniformis (strain ATCC 14580 / DSM 13 / JCM 2505 / CCUG 7422 / NBRC 12200 / NCIMB 9375 / NCTC 10341 / NRRL NRS-1264 / Gibson 46)
A4IK95 0.0 545 54 2 473 3 lutB Lactate utilization protein B Geobacillus thermodenitrificans (strain NG80-2)
C4L0S1 0.0 531 55 3 458 3 lutB Lactate utilization protein B Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b)
A9VI77 2.08e-180 516 54 2 471 3 lutB1 Lactate utilization protein B 1 Bacillus mycoides (strain KBAB4)
Q8ET91 1.3e-176 506 51 5 480 3 lutB Lactate utilization protein B Oceanobacillus iheyensis (strain DSM 14371 / CIP 107618 / JCM 11309 / KCTC 3954 / HTE831)
Q9KBU0 7.96e-07 53 27 2 104 3 lutC Lactate utilization protein C Halalkalibacterium halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
P84621 3.86e-06 50 32 4 87 1 hdlC Heterodisulfide reductase subunit C-like protein Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18)
O29748 6.64e-06 52 25 3 144 1 hmeD Hdr-like menaquinol oxidoreductase iron-sulfur subunit 2 Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16)
Q8TIB9 2.69e-05 47 30 3 108 1 hdrC2 Ferredoxin/F(420)H(2)-dependent CoB-CoM heterodisulfide reductase subunit C Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A)
Q8PY84 7.87e-05 46 26 2 109 3 hdrC Ferredoxin:CoB-CoM heterodisulfide reductase subunit C Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88)
A9VI78 0.000114 47 26 2 107 3 lutC1 Lactate utilization protein C 1 Bacillus mycoides (strain KBAB4)
Q65EM1 0.000177 46 26 3 115 3 lutC Lactate utilization protein C Bacillus licheniformis (strain ATCC 14580 / DSM 13 / JCM 2505 / CCUG 7422 / NBRC 12200 / NCIMB 9375 / NCTC 10341 / NRRL NRS-1264 / Gibson 46)
C5D585 0.000297 45 26 1 86 3 lutC Lactate utilization protein C Geobacillus sp. (strain WCH70)
Q8ET90 0.000637 45 25 2 105 3 lutC Lactate utilization protein C Oceanobacillus iheyensis (strain DSM 14371 / CIP 107618 / JCM 11309 / KCTC 3954 / HTE831)
P43801 0.001 45 27 9 172 3 glpC Anaerobic glycerol-3-phosphate dehydrogenase subunit C Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS09545
Feature type CDS
Gene -
Product LutB/LldF family L-lactate oxidation iron-sulfur protein
Location 2083647 - 2085068 (strand: 1)
Length 1422 (nucleotides) / 473 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_3895
Orthogroup size 2
N. genomes 1

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Genomic region

Domains

PF02589 LUD domain
PF11870 Lactate utilisation protein B, C-terminal
PF13183 4Fe-4S dicluster domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1139 Energy production and conversion (C) C L-lactate utilization protein LutB, contains a ferredoxin-type domain

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K18929 L-lactate dehydrogenase complex protein LldF - -

Protein Sequence

MSIKTSNIDFRPRLAHEMNDTIMRNAVVMAQERIGANRQIMVKELGDWEAWRDRAEQIRNHVLENLDAYLYQLSEKVTENGGHVYFAKTAEDATRYICNVAKQKNAKKIVKSKSMVTEEIGMNKALQNEGIEIIETDLGEYILQLDNDPPSHIVVPAIHKDRYQIRKVLNEKLGYQGSETPEDMTLFIRQRIRQDFLSADIGVTGCNFAVAETGSVCLVTNEGNARMTTTLPKTHIAVMGMERVAPTFEEVDPLITMLCRSAVGSRLTSYNTWVTGPREAGNVDGPEEFHLVIVDNGRSEILGSQFKDILRCIRCGACLNTCPAYRNIGGHAYGSIYPGPIGAVISPLLGGYKDFHDLPYACSLCNACNVVCPVKIPLAQLILKHRRVMAESGLTPKAERRVTGMFNYINAHPTLWKVGMNVGAKMAGLMIKNGSTPIKISVLNDWMASRDLPKPDGYSFRSWFKRHKAEGKK

Flanking regions ( +/- flanking 50bp)

CAAAGTGCTGCATATTGCACAAGTTTTAATGAGTCAATAAGGGGGCTGCAATGTCTATTAAAACCAGTAATATCGATTTTAGACCACGCTTAGCGCATGAAATGAATGATACCATTATGCGTAACGCCGTTGTTATGGCACAAGAGCGCATTGGAGCCAATCGCCAAATAATGGTAAAAGAGTTAGGTGATTGGGAAGCGTGGCGTGATCGTGCAGAACAAATCCGTAACCATGTTCTTGAAAACTTAGACGCTTATCTTTATCAATTATCAGAAAAAGTGACTGAAAATGGCGGTCATGTCTATTTTGCCAAAACAGCAGAAGATGCGACACGCTATATTTGTAACGTTGCCAAACAGAAAAATGCCAAGAAAATCGTCAAATCAAAATCGATGGTAACCGAAGAAATCGGTATGAACAAAGCCTTACAAAATGAAGGTATTGAGATTATCGAAACCGACCTTGGTGAATATATTCTGCAACTGGATAACGATCCCCCTTCTCATATTGTTGTGCCGGCGATCCATAAAGATCGCTACCAAATACGTAAAGTACTAAATGAAAAACTAGGTTATCAAGGTAGTGAAACCCCTGAAGATATGACCCTTTTTATCAGGCAACGTATTCGACAAGATTTTCTTTCTGCTGATATTGGAGTCACAGGTTGTAACTTTGCGGTTGCAGAAACGGGCTCTGTCTGTTTAGTAACTAACGAAGGTAATGCACGGATGACGACCACATTACCTAAAACCCATATTGCCGTTATGGGGATGGAACGTGTTGCGCCTACTTTTGAAGAAGTCGATCCACTGATCACGATGTTATGTCGTAGTGCGGTTGGCTCACGCCTAACCAGTTATAACACTTGGGTAACTGGACCTCGTGAAGCGGGTAATGTTGATGGCCCTGAAGAATTTCATTTAGTGATTGTCGATAATGGTCGCTCTGAAATTTTAGGCTCACAATTTAAAGATATTCTACGCTGTATCCGTTGTGGAGCCTGTCTAAACACCTGTCCTGCTTATCGTAATATCGGTGGTCATGCTTATGGCTCTATTTATCCCGGCCCTATCGGTGCGGTTATTTCGCCACTCTTAGGAGGCTATAAAGATTTTCATGACTTACCTTACGCCTGCTCATTATGCAATGCATGTAATGTGGTCTGTCCGGTCAAAATCCCTTTAGCACAATTGATCCTTAAACATCGTCGAGTCATGGCGGAAAGTGGTTTAACACCAAAAGCTGAGCGTCGTGTAACCGGTATGTTTAATTACATTAATGCGCACCCCACGCTTTGGAAAGTTGGCATGAATGTAGGGGCTAAGATGGCGGGCTTGATGATCAAAAATGGCTCAACTCCAATCAAGATAAGTGTACTCAATGATTGGATGGCATCACGTGATCTCCCAAAACCCGATGGTTATAGTTTCCGTAGTTGGTTTAAGCGCCACAAAGCAGAAGGAAAAAAATAATATGTTAAACGAACAAAATCGTGCTGAGTTTCTGCAAACTATTGCTCAAA