Homologs in group_1590

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_10370 FBDBKF_10370 75.4 Morganella morganii S1 hslR ribosome-associated heat shock protein Hsp15
EHELCC_14705 EHELCC_14705 75.4 Morganella morganii S2 hslR ribosome-associated heat shock protein Hsp15
NLDBIP_14535 NLDBIP_14535 75.4 Morganella morganii S4 hslR ribosome-associated heat shock protein Hsp15
LHKJJB_14810 LHKJJB_14810 75.4 Morganella morganii S3 hslR ribosome-associated heat shock protein Hsp15
HKOGLL_13430 HKOGLL_13430 75.4 Morganella morganii S5 hslR ribosome-associated heat shock protein Hsp15
F4V73_RS14065 F4V73_RS14065 72.7 Morganella psychrotolerans hslR ribosome-associated heat shock protein Hsp15

Distribution of the homologs in the orthogroup group_1590

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1590

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0ACG8 7.78e-61 186 73 0 123 1 hslR Heat shock protein 15 Escherichia coli (strain K12)
P0ACG9 7.78e-61 186 73 0 123 3 hslR Heat shock protein 15 Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0ACH0 7.78e-61 186 73 0 123 3 hslR Heat shock protein 15 Escherichia coli O157:H7
P44754 1.37e-55 172 64 0 126 3 hslR Heat shock protein 15 homolog Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q44264 1.01e-48 155 61 1 131 3 hslR Heat shock protein 15 homolog Aeromonas salmonicida
Q92F59 3.48e-07 48 42 0 52 4 lin0248 Uncharacterized protein Lin0248 Listeria innocua serovar 6a (strain ATCC BAA-680 / CLIP 11262)
Q9ZIM1 3.63e-07 48 42 0 52 4 lmo0216 Uncharacterized protein Lmo0216 Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e)
P64406 3.8e-06 45 34 0 61 4 spr0007 Uncharacterized protein spr0007 Streptococcus pneumoniae (strain ATCC BAA-255 / R6)
P64405 3.8e-06 45 34 0 61 4 SP_0007 Uncharacterized protein SP_0007 Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)
P37557 4.75e-05 42 36 0 60 1 yabO Uncharacterized protein YabO Bacillus subtilis (strain 168)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS14925
Feature type CDS
Gene hslR
Product ribosome-associated heat shock protein Hsp15
Location 3312290 - 3312703 (strand: -1)
Length 414 (nucleotides) / 137 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1590
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF01479 S4 domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1188 Translation, ribosomal structure and biogenesis (J) J Ribosomal 50S subunit-recycling heat shock protein, contains S4 domain

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K04762 ribosome-associated heat shock protein Hsp15 - -

Protein Sequence

MSQPSQESAVRLDKWLWAARFYKTRAIARTMIEGGKVHYNGVRGKPSKNVEVGAEIRLRQGNDERTVTVLMVSAQRLGAAQAQLLYCETPESIAKREKIALARKMNALTMPHPERRPDKKERRTLLRLKQTNLPGSD

Flanking regions ( +/- flanking 50bp)

TGTTTACTCTATCGCCTTCATGAAGAAGTTGAAGTTAAGGAGAGAAAGGGATGAGTCAACCATCGCAAGAAAGCGCTGTCCGTTTAGATAAATGGCTTTGGGCTGCACGTTTTTATAAAACGCGTGCCATTGCTCGCACTATGATTGAAGGGGGTAAAGTCCATTACAATGGTGTGCGAGGCAAGCCAAGTAAAAATGTTGAAGTTGGGGCTGAAATACGCTTACGACAAGGTAATGATGAACGGACAGTTACAGTCTTAATGGTGAGTGCACAGCGCCTAGGGGCGGCCCAAGCACAATTGCTCTATTGTGAAACACCAGAGAGTATTGCCAAGAGAGAAAAAATCGCTCTAGCAAGAAAAATGAATGCGTTAACGATGCCTCATCCCGAACGTCGACCTGATAAAAAGGAAAGACGCACCTTACTTCGCTTGAAACAGACAAATTTACCAGGATCGGATTAAACCGCTCCCCAGCAATGAGAGAAGATTATGTCTAAAAAAGACGCTTTATC