Homologs in group_1590

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_10370 FBDBKF_10370 94.1 Morganella morganii S1 hslR ribosome-associated heat shock protein Hsp15
EHELCC_14705 EHELCC_14705 94.1 Morganella morganii S2 hslR ribosome-associated heat shock protein Hsp15
NLDBIP_14535 NLDBIP_14535 94.1 Morganella morganii S4 hslR ribosome-associated heat shock protein Hsp15
LHKJJB_14810 LHKJJB_14810 94.1 Morganella morganii S3 hslR ribosome-associated heat shock protein Hsp15
HKOGLL_13430 HKOGLL_13430 94.1 Morganella morganii S5 hslR ribosome-associated heat shock protein Hsp15
PMI_RS14925 PMI_RS14925 72.7 Proteus mirabilis HI4320 hslR ribosome-associated heat shock protein Hsp15

Distribution of the homologs in the orthogroup group_1590

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1590

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0ACG8 2.41e-63 192 69 0 131 1 hslR Heat shock protein 15 Escherichia coli (strain K12)
P0ACG9 2.41e-63 192 69 0 131 3 hslR Heat shock protein 15 Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0ACH0 2.41e-63 192 69 0 131 3 hslR Heat shock protein 15 Escherichia coli O157:H7
P44754 4e-56 174 63 0 127 3 hslR Heat shock protein 15 homolog Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q44264 3.34e-51 161 63 0 121 3 hslR Heat shock protein 15 homolog Aeromonas salmonicida
Q92F59 4.24e-07 48 42 0 52 4 lin0248 Uncharacterized protein Lin0248 Listeria innocua serovar 6a (strain ATCC BAA-680 / CLIP 11262)
Q9ZIM1 4.38e-07 48 42 0 52 4 lmo0216 Uncharacterized protein Lmo0216 Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e)
Q9KGI8 5.41e-07 47 31 1 85 4 BH0073 Uncharacterized protein BH0073 Halalkalibacterium halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
P37557 0.00011 41 32 0 65 1 yabO Uncharacterized protein YabO Bacillus subtilis (strain 168)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS14065
Feature type CDS
Gene hslR
Product ribosome-associated heat shock protein Hsp15
Location 25028 - 25435 (strand: -1)
Length 408 (nucleotides) / 135 (amino acids)

Contig

Accession term accessions NZ_VXKB01000004 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 258164 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1590
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF01479 S4 domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1188 Translation, ribosomal structure and biogenesis (J) J Ribosomal 50S subunit-recycling heat shock protein, contains S4 domain

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K04762 ribosome-associated heat shock protein Hsp15 - -

Protein Sequence

MQQASAPVRLDKWLWAARFYKTRSVARTMIDGGKVHYNGQRSKPGKLVENGATLVLRQGNDERTIRILGITDKRLSAPLAQQLWEETPESIEKREKTALARKMNVLTMPHPERRPDKKERRTLLKFKHSNSDTAE

Flanking regions ( +/- flanking 50bp)

ATTCAGGATACAGTCTGAAAGAATAAGGGTGCATCTGTAACGGAGTAACCATGCAACAGGCTTCAGCACCTGTCCGCCTTGATAAATGGCTTTGGGCGGCACGGTTTTACAAAACCCGCTCAGTCGCCAGAACCATGATTGACGGCGGAAAGGTTCATTATAACGGGCAGCGCAGCAAGCCCGGAAAACTGGTTGAAAACGGAGCAACTCTCGTCCTGCGTCAGGGAAATGATGAACGGACGATCCGTATTCTCGGCATAACTGATAAACGTCTGAGCGCACCGCTGGCACAACAACTCTGGGAAGAAACTCCGGAGAGTATTGAAAAGCGTGAAAAAACAGCACTCGCACGTAAAATGAATGTCCTGACCATGCCGCATCCGGAACGACGTCCTGATAAAAAGGAACGACGGACATTATTGAAATTTAAACACAGTAATTCAGATACCGCAGAGTGATCTGCGGTCAACATGAGAGAAAATTATGTCTGTACGACACGACACATTAC