Homologs in group_1584

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_10335 FBDBKF_10335 65.5 Morganella morganii S1 uspB universal stress protein UspB
EHELCC_14670 EHELCC_14670 65.5 Morganella morganii S2 uspB universal stress protein UspB
NLDBIP_14500 NLDBIP_14500 65.5 Morganella morganii S4 uspB universal stress protein UspB
LHKJJB_14845 LHKJJB_14845 65.5 Morganella morganii S3 uspB universal stress protein UspB
HKOGLL_13465 HKOGLL_13465 65.5 Morganella morganii S5 uspB universal stress protein UspB
F4V73_RS14035 F4V73_RS14035 61.8 Morganella psychrotolerans uspB universal stress protein UspB

Distribution of the homologs in the orthogroup group_1584

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1584

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P59988 8.01e-54 166 67 0 110 3 uspB Universal stress protein B Photorhabdus laumondii subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01)
A6TFB2 5.17e-46 147 61 0 110 3 uspB Universal stress protein B Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
B5XN50 5.17e-46 147 61 0 110 3 uspB Universal stress protein B Klebsiella pneumoniae (strain 342)
Q6DB52 5.89e-46 146 62 0 110 3 uspB Universal stress protein B Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672)
A9MM62 2.24e-45 145 60 0 110 3 uspB Universal stress protein B Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
Q3YW37 2.32e-45 145 60 0 110 3 uspB Universal stress protein B Shigella sonnei (strain Ss046)
P0A8S8 2.32e-45 145 60 0 110 3 uspB Universal stress protein B Shigella flexneri
Q0SZH0 2.32e-45 145 60 0 110 3 uspB Universal stress protein B Shigella flexneri serotype 5b (strain 8401)
Q32AW3 2.32e-45 145 60 0 110 3 uspB Universal stress protein B Shigella dysenteriae serotype 1 (strain Sd197)
Q31VD1 2.32e-45 145 60 0 110 3 uspB Universal stress protein B Shigella boydii serotype 4 (strain Sb227)
B2U3Q2 2.32e-45 145 60 0 110 3 uspB Universal stress protein B Shigella boydii serotype 18 (strain CDC 3083-94 / BS512)
Q1R5C2 2.32e-45 145 60 0 110 3 uspB Universal stress protein B Escherichia coli (strain UTI89 / UPEC)
B6I356 2.32e-45 145 60 0 110 3 uspB Universal stress protein B Escherichia coli (strain SE11)
B7NEC5 2.32e-45 145 60 0 110 3 uspB Universal stress protein B Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
P0A8S5 2.32e-45 145 60 0 110 1 uspB Universal stress protein B Escherichia coli (strain K12)
B1J0D8 2.32e-45 145 60 0 110 3 uspB Universal stress protein B Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
P0A8S6 2.32e-45 145 60 0 110 3 uspB Universal stress protein B Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TBW9 2.32e-45 145 60 0 110 3 uspB Universal stress protein B Escherichia coli O6:K15:H31 (strain 536 / UPEC)
A1AH31 2.32e-45 145 60 0 110 3 uspB Universal stress protein B Escherichia coli O1:K1 / APEC
A8A5V1 2.32e-45 145 60 0 110 3 uspB Universal stress protein B Escherichia coli O9:H4 (strain HS)
B1X7U9 2.32e-45 145 60 0 110 3 uspB Universal stress protein B Escherichia coli (strain K12 / DH10B)
C4ZW41 2.32e-45 145 60 0 110 3 uspB Universal stress protein B Escherichia coli (strain K12 / MC4100 / BW2952)
B7M2Q4 2.32e-45 145 60 0 110 3 uspB Universal stress protein B Escherichia coli O8 (strain IAI1)
B7N1S8 2.32e-45 145 60 0 110 3 uspB Universal stress protein B Escherichia coli O81 (strain ED1a)
B7NNB6 2.32e-45 145 60 0 110 3 uspB Universal stress protein B Escherichia coli O7:K1 (strain IAI39 / ExPEC)
P0A8S7 2.32e-45 145 60 0 110 3 uspB Universal stress protein B Escherichia coli O157:H7
B7L5X4 2.32e-45 145 60 0 110 3 uspB Universal stress protein B Escherichia coli (strain 55989 / EAEC)
B7MEI9 2.32e-45 145 60 0 110 3 uspB Universal stress protein B Escherichia coli O45:K1 (strain S88 / ExPEC)
B7UL42 2.32e-45 145 60 0 110 3 uspB Universal stress protein B Escherichia coli O127:H6 (strain E2348/69 / EPEC)
A7ZT30 2.32e-45 145 60 0 110 3 uspB Universal stress protein B Escherichia coli O139:H28 (strain E24377A / ETEC)
B1JHV1 2.34e-45 145 58 0 110 3 uspB Universal stress protein B Yersinia pseudotuberculosis serotype O:3 (strain YPIII)
Q664F8 2.34e-45 145 58 0 110 3 uspB Universal stress protein B Yersinia pseudotuberculosis serotype I (strain IP32953)
A4TQX7 2.34e-45 145 58 0 110 3 uspB Universal stress protein B Yersinia pestis (strain Pestoides F)
Q1CDI5 2.34e-45 145 58 0 110 3 uspB Universal stress protein B Yersinia pestis bv. Antiqua (strain Nepal516)
Q8ZA50 2.34e-45 145 58 0 110 3 uspB Universal stress protein B Yersinia pestis
B2K6K2 2.34e-45 145 58 0 110 3 uspB Universal stress protein B Yersinia pseudotuberculosis serotype IB (strain PB1/+)
Q1C1B3 2.34e-45 145 58 0 110 3 uspB Universal stress protein B Yersinia pestis bv. Antiqua (strain Antiqua)
A7FP02 2.34e-45 145 58 0 110 3 uspB Universal stress protein B Yersinia pseudotuberculosis serotype O:1b (strain IP 31758)
P67686 3.15e-45 144 60 0 110 3 uspB Universal stress protein B Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P67687 3.15e-45 144 60 0 110 3 uspB Universal stress protein B Salmonella typhi
B5BHN6 3.15e-45 144 60 0 110 3 uspB Universal stress protein B Salmonella paratyphi A (strain AKU_12601)
C0Q145 3.15e-45 144 60 0 110 3 uspB Universal stress protein B Salmonella paratyphi C (strain RKS4594)
Q5PJP1 3.15e-45 144 60 0 110 3 uspB Universal stress protein B Salmonella paratyphi A (strain ATCC 9150 / SARB42)
B5RGT6 3.15e-45 144 60 0 110 3 uspB Universal stress protein B Salmonella gallinarum (strain 287/91 / NCTC 13346)
B5R3Z1 3.15e-45 144 60 0 110 3 uspB Universal stress protein B Salmonella enteritidis PT4 (strain P125109)
Q57IN7 3.15e-45 144 60 0 110 3 uspB Universal stress protein B Salmonella choleraesuis (strain SC-B67)
C5BB13 5.89e-45 144 59 0 110 3 uspB Universal stress protein B Edwardsiella ictaluri (strain 93-146)
A1JSP6 6.64e-45 144 58 0 110 3 uspB Universal stress protein B Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
B7LSX5 8.27e-45 144 60 0 110 3 uspB Universal stress protein B Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73)
A4WFT3 5.56e-44 141 58 0 110 3 uspB Universal stress protein B Enterobacter sp. (strain 638)
A8AR73 3.11e-43 139 56 0 110 3 uspB Universal stress protein B Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)
A7MKM3 7.63e-43 139 59 0 110 3 uspB Universal stress protein B Cronobacter sakazakii (strain ATCC BAA-894)
B2VHE5 4.17e-42 137 57 0 110 3 uspB Universal stress protein B Erwinia tasmaniensis (strain DSM 17950 / CFBP 7177 / CIP 109463 / NCPPB 4357 / Et1/99)
C6DJB7 3.59e-39 129 62 0 110 3 uspB Universal stress protein B Pectobacterium carotovorum subsp. carotovorum (strain PC1)
Q87TJ1 2.43e-28 102 44 2 109 3 uspB Universal stress protein B homolog Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
A7MTY8 6.15e-28 100 44 2 109 3 uspB Universal stress protein B homolog Vibrio campbellii (strain ATCC BAA-1116)
B7VHB5 1.44e-26 97 42 2 109 3 uspB Universal stress protein B homolog Vibrio atlanticus (strain LGP32)
C3LPS1 1.86e-26 97 40 2 109 3 uspB Universal stress protein B homolog Vibrio cholerae serotype O1 (strain M66-2)
Q9KVR0 1.86e-26 97 40 2 109 3 uspB Universal stress protein B homolog Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
A5F4E9 1.86e-26 97 40 2 109 3 uspB Universal stress protein B homolog Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)
Q7MQD2 2.21e-25 94 41 1 94 3 uspB Universal stress protein B homolog Vibrio vulnificus (strain YJ016)
Q8DD90 2.21e-25 94 41 1 94 3 uspB Universal stress protein B homolog Vibrio vulnificus (strain CMCP6)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS14885
Feature type CDS
Gene uspB
Product universal stress protein UspB
Location 3304168 - 3304500 (strand: 1)
Length 333 (nucleotides) / 110 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1584
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF10625 Universal stress protein B (UspB)

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K06144 universal stress protein B - -

Protein Sequence

MFSVIVIFWALCILCLINMMRYFSSIRVLLTILRQSDPLLYQSVDGNGFFTMHGQFSKQLRLIRYINQRQYTNHHDPEVIMRCERIYRQFYLVSRFCILAVASLIAMIIW

Flanking regions ( +/- flanking 50bp)

AATGCAAAAGGTTTTCTCATCTCAGAATCAGCTATTCTAGGGAGGGGATTATGTTTAGTGTCATTGTTATCTTTTGGGCGTTGTGTATTCTTTGCCTGATTAATATGATGCGTTATTTCTCATCAATTCGGGTATTACTCACCATATTGCGCCAATCTGATCCATTACTTTACCAATCTGTCGATGGGAATGGATTTTTCACTATGCATGGTCAATTTTCAAAACAGTTAAGACTTATTCGATATATAAATCAACGCCAATATACTAACCACCATGATCCTGAAGTGATTATGCGTTGTGAACGGATTTATCGACAATTCTACCTAGTAAGTCGCTTTTGTATTCTTGCTGTAGCAAGCTTGATCGCCATGATTATTTGGTAGGTTTTATAGGGATAAAAAAACGGTGACGAGTTAGTCACCGTTTCTCAATA