Homologs in group_2291

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_17610 FBDBKF_17610 78.5 Morganella morganii S1 thiH 2-iminoacetate synthase ThiH
EHELCC_18095 EHELCC_18095 78.5 Morganella morganii S2 thiH 2-iminoacetate synthase ThiH
NLDBIP_18055 NLDBIP_18055 78.5 Morganella morganii S4 thiH 2-iminoacetate synthase ThiH
LHKJJB_18250 LHKJJB_18250 78.5 Morganella morganii S3 thiH 2-iminoacetate synthase ThiH
HKOGLL_17950 HKOGLL_17950 78.5 Morganella morganii S5 thiH 2-iminoacetate synthase ThiH
F4V73_RS14990 F4V73_RS14990 76.9 Morganella psychrotolerans thiH 2-iminoacetate synthase ThiH

Distribution of the homologs in the orthogroup group_2291

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_2291

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q9S498 0.0 593 74 0 372 1 thiH 2-iminoacetate synthase Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P30140 0.0 591 73 0 372 1 thiH 2-iminoacetate synthase Escherichia coli (strain K12)
Q46E78 1.54e-10 65 22 12 355 1 pylB 3-methylornithine synthase Methanosarcina barkeri (strain Fusaro / DSM 804)
Q8TUB9 1.22e-08 59 27 4 151 1 pylB 3-methylornithine synthase Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A)
Q9X0Z6 8.25e-06 50 22 4 206 1 TM_1269 [FeFe] hydrogenase maturase subunit HydE Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8)
Q7UF84 0.000269 46 24 12 257 3 bioB Biotin synthase Rhodopirellula baltica (strain DSM 10527 / NCIMB 13988 / SH1)
A3CRI3 0.000767 44 28 4 111 3 cofH 5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS13740
Feature type CDS
Gene thiH
Product 2-iminoacetate synthase ThiH
Location 3051023 - 3052141 (strand: 1)
Length 1119 (nucleotides) / 372 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_2291
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF04055 Radical SAM superfamily
PF06968 Biotin and Thiamin Synthesis associated domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1060 Coenzyme transport and metabolism (H) H 2-iminoacetate synthase ThiH/Menaquinone biosynthesis enzymes MqnC and MqnE

Kegg Ortholog Annotation(s)

Protein Sequence

MKTFSDYWQQLDWDDITLRLNSKTCEDVETALSHHTLTLDDFMALISPAGRHYLEPMAQRAQQLTRQRFGNVVGLYVPLYLSNLCANDCTYCGFSMSNAIKRKTLNENEILAECHSIRQLGFDSLLLVTGEHQRKVGMDYFRQYIPLIRQQFSLLMMEVQPLATNEYAELKTLGIDGVMVYQETYHEPTYQLHHLRGKKQDFHWRLQTPDRLGQAGIDKIGLGALIGLSDRWRTDCYMVAEHLLFLQKRYWKSRYSISFPRLRPCAGGLNPASVMSEAELVQLICAFRILAPDVELSLSTRESPYFRDNTVPLAINNISAGSKTQPGGYSDSHEELEQFSPNDNRHVSDVINALKTRGLQPVWKDWDNYLGR

Flanking regions ( +/- flanking 50bp)

ATGCAAGCACAAGCCTCTAGCCCATTAACCCAATATTTAGAGGCTTTCTAATGAAAACATTTTCTGATTATTGGCAACAATTAGATTGGGATGACATCACGTTAAGACTGAATAGTAAAACTTGTGAAGATGTTGAAACTGCTTTATCTCATCATACTTTAACGCTTGATGATTTTATGGCGCTGATCTCCCCTGCTGGCCGACATTATTTAGAGCCAATGGCACAACGTGCCCAGCAACTAACTCGACAACGTTTTGGTAATGTTGTCGGTTTATATGTTCCACTGTACCTCTCTAATTTATGTGCTAATGATTGCACTTATTGTGGCTTTTCAATGAGTAATGCCATCAAGCGCAAAACATTAAATGAAAACGAAATCCTTGCTGAATGTCATAGCATTCGGCAATTAGGTTTTGATAGCCTGCTACTCGTTACAGGAGAGCATCAAAGAAAAGTTGGTATGGATTATTTCCGTCAATATATACCGCTTATTCGCCAGCAGTTCAGTTTATTAATGATGGAAGTACAACCTCTGGCGACAAATGAGTACGCTGAATTAAAAACGCTCGGTATTGATGGTGTAATGGTTTATCAAGAAACCTATCATGAACCCACTTATCAGTTGCATCATCTAAGAGGAAAAAAACAAGATTTTCATTGGCGGTTACAAACCCCTGATAGATTAGGGCAAGCCGGCATTGATAAAATTGGTTTAGGTGCACTAATTGGTTTATCTGACAGATGGCGTACCGATTGTTATATGGTGGCTGAGCATCTGCTATTTTTACAAAAACGTTACTGGAAAAGTCGTTACTCTATCTCCTTTCCTCGTCTACGCCCATGTGCTGGTGGGCTTAATCCTGCATCGGTAATGAGTGAAGCAGAATTAGTTCAGTTGATTTGTGCTTTTCGTATTTTAGCCCCCGATGTTGAGCTTTCCCTTTCAACACGTGAATCGCCTTACTTTCGCGATAATACAGTACCTTTAGCCATCAATAATATCAGCGCTGGCTCTAAAACTCAGCCCGGTGGTTATTCTGATAGTCATGAGGAGTTAGAGCAATTTTCACCTAATGATAATCGTCATGTCAGTGATGTAATTAATGCTCTCAAAACACGAGGATTACAGCCTGTATGGAAAGATTGGGATAACTATTTAGGTCGTTAATAGAGATAAAATAATACCGCGTTTTAATTTATTTTTTTAATAAATATAAT