Homologs in group_1273

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_07565 FBDBKF_07565 32.6 Morganella morganii S1 eutN ethanolamine utilization microcompartment protein EutN
EHELCC_17235 EHELCC_17235 32.6 Morganella morganii S2 eutN ethanolamine utilization microcompartment protein EutN
NLDBIP_13840 NLDBIP_13840 32.6 Morganella morganii S4 eutN ethanolamine utilization microcompartment protein EutN
LHKJJB_09010 LHKJJB_09010 32.6 Morganella morganii S3 eutN ethanolamine utilization microcompartment protein EutN
HKOGLL_08560 HKOGLL_08560 32.6 Morganella morganii S5 eutN ethanolamine utilization microcompartment protein EutN
F4V73_RS13555 F4V73_RS13555 33.7 Morganella psychrotolerans eutN ethanolamine utilization microcompartment protein EutN

Distribution of the homologs in the orthogroup group_1273

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1273

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q8YYI2 5.15e-10 54 39 1 87 1 ccmL Carboxysome shell vertex protein CcmL Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)
P72759 5.67e-10 54 47 1 68 1 ccmL Carboxysome shell vertex protein CcmL Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
D0LHE5 1.75e-08 50 42 1 57 1 Hoch_5814 Bacterial microcompartment shell vertex protein Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2)
P0DUM1 4.01e-08 49 40 1 75 1 grpN Bacterial microcompartment shell vertex protein GrpN Rhodospirillum rubrum (strain F11)
P0DUV6 8.74e-08 48 39 5 93 1 pduN Bacterial microcompartment shell vertex protein PduN Citrobacter freundii
Q9XDN3 9.52e-08 48 50 3 61 1 pduN Bacterial microcompartment shell vertex protein PduN Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q7NIT8 8.57e-06 43 31 2 91 1 ccmL Carboxysome shell vertex protein CcmL Gloeobacter violaceus (strain ATCC 29082 / PCC 7421)
Q03512 8.97e-06 43 43 1 57 1 ccmL Carboxysome shell vertex protein CcmL Synechococcus elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)
P41792 9.75e-05 40 31 2 91 1 eutN Bacterial microcompartment shell vertex protein EutN Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0AEJ8 0.000626 38 38 1 57 1 eutN Bacterial microcompartment shell vertex protein EutN Escherichia coli (strain K12)
P0AEJ9 0.000626 38 38 1 57 3 eutN Bacterial microcompartment shell vertex protein EutN Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS13395
Feature type CDS
Gene -
Product EutN/CcmL family microcompartment protein
Location 2969932 - 2970195 (strand: -1)
Length 264 (nucleotides) / 87 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1273
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF03319 Ethanolamine utilisation protein EutN/carboxysome

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4576 Secondary metabolites biosynthesis, transport and catabolism (Q)
Energy production and conversion (C)		 QC Carboxysome shell and ethanolamine utilization microcompartment protein CcmK/EutM

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K04028 ethanolamine utilization protein EutN - -

Protein Sequence

MILAKVIGHVVATQKSPELKGSNLLMIATLDDELNPLKNKTYVAVDSVGAGINDVVLAEEYFALNKDRYKAMSVVAIVEKVYRDSKE

Flanking regions ( +/- flanking 50bp)

GTTCTCGGACGTCTGGGTAAATAACTCATTGATAGAAGGCGATATAAACCATGATCCTCGCAAAGGTAATCGGACACGTAGTCGCGACACAAAAAAGCCCTGAACTGAAAGGAAGCAATTTATTAATGATAGCGACCTTAGATGATGAGCTTAATCCACTGAAAAATAAAACCTATGTTGCAGTGGATAGTGTGGGTGCAGGTATCAACGATGTGGTGTTGGCTGAAGAATACTTCGCACTAAACAAAGATCGTTACAAGGCGATGTCCGTGGTTGCCATTGTTGAGAAGGTTTATCGGGACAGTAAGGAGTAATAACGACATGAGTGAGTTTCTGATAAAACCCAAAATTCAGTTTGGCACCA